DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11069 and ABCG4

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_194305.1 Gene:ABCG4 / 828680 AraportID:AT4G25750 Length:577 Species:Arabidopsis thaliana


Alignment Length:560 Identity:151/560 - (26%)
Similarity:256/560 - (45%) Gaps:68/560 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AGNSALVLKGVNLTVHSGEVMAILGSKGSGKRALLDVISRRADGATRGQVLLNGSPLSKALFQQR 94
            |...:.:|:.:.||.|..:::||:|..|:||..|||:::.|. ..|.|.:|||...::.:.:::.
plant    24 AEQPSFILRNITLTSHPSQILAIIGPSGAGKSTLLDILAART-SPTSGSILLNSVLINPSSYRKI 87

  Fly    95 CGYVTQSCTFVPGLTVAQTLHYTPTIL--SGYLK-SSKVRQVLADLALSQVAHKRV-EYLNISEA 155
            ..||.|..||.|.|||::|..::.::|  ....| ||.|..:|.:|.|:.:||.|: :.|:..|.
plant    88 SSYVPQHDTFFPLLTVSETFTFSASLLLPKNLSKVSSVVASLLKELNLTHLAHTRLGQGLSGGER 152

  Fly   156 RRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPFLDR 220
            ||::||:.|:.||.:|||||||.|||..||:.::.||.:.|......::||:.:|...:...:||
plant   153 RRVSIGLSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIATSRERIVILSIHQPSFKILSLIDR 217

  Fly   221 ALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYLCLSTVDRRSRDRFLESSQQIEALVE 285
            .|.|..|.:||.|....:..:....||..|...|.|.|              .:|..|.|....|
plant   218 VLLLSKGTIVYHGRLDLLEAFLLSKGFTVPSQLNSLEY--------------AMEILQNIRDPYE 268

  Fly   286 RFSRETPISDAPLNNMGSGKVPLAYGKPGELKVWVMLYLKLLASTFSCGLVGMKTLFLRLLLLPL 350
            ..:...| ...|.:...:.|..:...|...:     ..:.||:|.|...:...:.|.|..:|..|
plant   269 NANIALP-DHCPESKKQNQKQSIVRYKSSRI-----TEISLLSSRFWKIIYRTRQLLLTNILESL 327

  Fly   351 ALS-ILWAFYTDVGDDSHGFFTKNGMI---LNILGLSYGCGILTTISLFPIW---RKKFSQDTPE 408
            .:. :|...|.::|....|...:.|:.   |..|       :.:|....||:   |....::|..
plant   328 VVGLVLGTIYLNIGTGKEGIRKRFGLFAFTLTFL-------LSSTTQTLPIFIDERPILLRETSS 385

  Fly   409 GLYSGTTLLIAYNSVSIPFSAVSAVIASCVVYPLLLDVKYNNGTVF-----AYLLVALWSSFVLA 468
            |||..::.::|...|.:|:..:.|:|.|..:|.|:       |..|     ||.::.:|...::|
plant   386 GLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLV-------GLCFSWQALAYFVLVIWIIVLMA 443

  Fly   469 EQLTIAFLLVVKVPFNAAIAVTYVLVISIALASGTVRSFKGL-QPWLQDNTKGTHTRYA------ 526
            ... :.||..:...:.|..:...:|:.:..|.||...|.:.| :.||.......: :||      
plant   444 NSF-VLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPKYWLFMYFFSMY-KYALDALLI 506

  Fly   527 --SSLLHS---IAFQSRKLN-CTPTASVICPKPADFMHER 560
              .|.||:   :.|:...:| |..|...:..|  :.:|||
plant   507 NEYSCLHNKCLVWFEEASVNSCLVTGGDVLDK--NGLHER 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 75/206 (36%)
CcmA 31..302 CDD:224054 87/274 (32%)
ABC2_membrane 364..515 CDD:304374 36/162 (22%)
ABCG4NP_194305.1 3a01204 30..572 CDD:273361 150/554 (27%)
P-loop_NTPase 30..230 CDD:304359 74/200 (37%)
ABC2_membrane 304..507 CDD:279410 49/218 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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