DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and ABCG17

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001319754.1 Gene:ABCG17 / 824676 AraportID:AT3G55100 Length:662 Species:Arabidopsis thaliana


Alignment Length:538 Identity:132/538 - (24%)
Similarity:234/538 - (43%) Gaps:112/538 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VLKGVNLTVHSGEVMAILGSKGSGKRALLDVISRR-ADGATRGQVLLNGSPLSKALFQQRCGYVT 99
            :|.|:......||::||||:.|:||..|:|.::.: |:|:.:|.|.|||..|...|.:....||.
plant    51 LLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLKGTVTLNGEALQSRLLRVISAYVM 115

  Fly   100 QSCTFVPGLTVAQTLHYT-----PTILSGYLKSSKVRQVLADLALSQV--------AHKRVEYLN 151
            |.....|.|||.:||.:.     |..||...|.::|..::..|.|:.|        .|:.|   :
plant   116 QEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGV---S 177

  Fly   152 ISEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFP 216
            ..|.||::||..::.||::|.|||||.|||..||::::.:|...| ::|..:::|:.:|...:..
plant   178 GGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVQVLKKIA-RSGSIVIMSIHQPSGRIME 241

  Fly   217 FLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYLCLSTVDRRSRDRFLESSQQ-I 280
            ||||.:.|..|.:|:|.....:..:|...|.|.|:.||...:.|.|.        :.||.|.: .
plant   242 FLDRVIVLSSGQIVFSDSPATLPLFFSEFGSPIPEKENIAEFTLDLI--------KDLEGSPEGT 298

  Fly   281 EALVERFS-----RETPISDAPLNNMGS-----------GK--------VPLAYGKPGELKVWVM 321
            ..||| |:     |:..:|..|.:|..|           ||        :| :|..|..::..::
plant   299 RGLVE-FNRNWQHRKLRVSQEPHHNSSSLGEAINASISRGKLVSTSYRSIP-SYVNPWWVETVIL 361

  Fly   322 LYLKLLASTFSCGLVGMKTLFLRLLLLPLALSILWAFYTDVGDDSHG------FFTKNGMILNIL 380
            ....::..|.:..|:|     .|:.::.:...:|...|..|.|...|      ||:     ..:.
plant   362 AKRYMINWTRTPELIG-----TRVFIVMMTGFLLATVYWKVDDSPRGVQERLSFFS-----FAMA 416

  Fly   381 GLSYGCGILTTISLFPIWRKKFSQDTPEGLYSGTTLLIAYNSVSIP---------------FSAV 430
            .:.|.|.  ..:..|...|..|.::|....|..::.:|:::.|::|               |..:
plant   417 TMFYSCA--DGLPAFIQERYIFLRETAHNAYRRSSYVISHSLVTLPHLFALSIGFAATTFWFVGL 479

  Fly   431 SAVIASCVVYPLLLDVKYNNG-------------------TVFAYL-LVALWSSFVLAEQ----- 470
            :..:|..:.|.:::...:.:|                   ..|.|| ...|:|.|.:...     
plant   480 NGGLAGFIYYLMIIFASFWSGCSFVTFVSGVIPNVMMSYMVTFGYLSYCLLFSGFYVNRDRIHLY 544

  Fly   471 -LTIAFLLVVKVPFNAAI 487
             :.|.::.::|.|:.|.:
plant   545 WIWIHYISLLKYPYEAVL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 71/210 (34%)
CcmA 31..302 CDD:224054 91/285 (32%)
ABC2_membrane 364..515 CDD:304374 28/171 (16%)
ABCG17NP_001319754.1 3a01204 18..661 CDD:273361 132/538 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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