DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and ABCG20

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_190919.1 Gene:ABCG20 / 824519 AraportID:AT3G53510 Length:739 Species:Arabidopsis thaliana


Alignment Length:562 Identity:144/562 - (25%)
Similarity:245/562 - (43%) Gaps:107/562 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SDYVLEAHNIFHTTEVD---------GGGCFNGAG---NSALVLKGVNLTVHSGEVMAILGSKGS 58
            |.:||...::.::.::.         |...|:|..   |:.::|.|::.....||:||:||:.||
plant    84 SPFVLSFKDLTYSVKIKKKFKPFPCCGNSPFDGNDMEMNTKVLLNGISGEAREGEMMAVLGASGS 148

  Fly    59 GKRALLDVISRR-ADGATRGQVLLNGSPLSKALFQQRCGYVTQSCTFVPGLTVAQTLHYT----- 117
            ||..|:|.::.| :..:.||.:.|||..|..:|.:....||.|.....|.|||.:||.::     
plant   149 GKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRL 213

  Fly   118 PTILSGYLKSSKVRQVLADLALSQVA--------HKRVEYLNISEARRLAIGIQLVRDPVMLLLD 174
            |:.||...|.::|:.::..|.|...|        |:.|   :..|.||::||..::.||::|.||
plant   214 PSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGV---SGGERRRVSIGTDIIHDPIILFLD 275

  Fly   175 EPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAML 239
            |||.|||..|||:::.:|...| ::|..:::|:.:|...:...||:.:||..|..||||....:.
plant   276 EPTSGLDSTSAYMVVKVLQRIA-QSGSIVIMSIHQPSYRILGLLDKLIFLSRGNTVYSGSPTHLP 339

  Fly   240 EYFHGIGFPCPQLENPLMYYLCL------------STVDRRSRDRFLESSQQIEALVERFSRETP 292
            ::|...|.|.|:.||...:.|.|            |.|:...:.|..::|.|     .|.:....
plant   340 QFFSEFGHPIPENENKPEFALDLIRELEDSPEGTKSLVEFHKQWRAKQTSSQ-----SRRNTNVS 399

  Fly   293 ISDAPLNNMGSGKVP----------LAYGKPGELKVWVMLYLKLLASTFSCGLVGMKTLFLRLLL 347
            :.||...::..||:.          ..:..|...::.|:....:|.|.....|.|     :||..
plant   400 LKDAISASISRGKLVSGATNLRSSFQTFANPFWTEMLVIGKRSILNSRRQPELFG-----IRLGA 459

  Fly   348 LPLALSILWAFYTDVGDDSHGFFTKNGMILNILGLS-YGCGILTTISLFPIWRKKFSQDTPEGLY 411
            :.:...||...:..:.:...|...:.|.....:..: |.|.  ..|.:|...|..|.::|....|
plant   460 VLVTGMILATIFWKLDNSPRGIQERLGFFAFAMSTTFYTCA--EAIPVFLQERYIFMRETAYNAY 522

  Fly   412 SGTTLLIAYNSVSIP-------------FSAVSAVIASCVVYPLLLDVKYNNGTVFAY--LLVAL 461
            ..::.::|:..:|||             ||||.....|             .|.:|.:  :|.|.
plant   523 RRSSYVLAHTIISIPALIILSAAFAASTFSAVGLAGGS-------------EGFLFFFFTILTAF 574

  Fly   462 W--SSFV-----LAEQLTIAFLLVVKVPFNAAIAVTYVLVIS 496
            |  ||||     :...:.|.|.:||.:       :.|.|:.|
plant   575 WAGSSFVTFLSGVVSHVMIGFTVVVAI-------LAYFLLFS 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 76/243 (31%)
CcmA 31..302 CDD:224054 91/299 (30%)
ABC2_membrane 364..515 CDD:304374 35/156 (22%)
ABCG20NP_190919.1 P-loop_NTPase 119..333 CDD:304359 73/217 (34%)
3a01204 120..738 CDD:273361 138/526 (26%)
ABC2_membrane 438..641 CDD:279410 43/199 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.