DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and ABCG2

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_181272.1 Gene:ABCG2 / 818312 AraportID:AT2G37360 Length:755 Species:Arabidopsis thaliana


Alignment Length:552 Identity:148/552 - (26%)
Similarity:249/552 - (45%) Gaps:81/552 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SDYVLEAHNIFHTTEVDGG----GCFNGAGNSA-----LVLKGVNLTVHSGEVMAILGSKGSGKR 61
            |.:||...::.::.::...    .|...:||.:     ::|.|::.....||:||:||:.||||.
plant    94 SPFVLSFTDLTYSVKIQKKFNPLACCRRSGNDSSVNTKILLNGISGEAREGEMMAVLGASGSGKS 158

  Fly    62 ALLDVISRR-ADGATRGQVLLNGSPLSKALFQQRCGYVTQSCTFVPGLTVAQTLHYT-----PTI 120
            .|:|.::.| |..:.||.:.|||..|..::.:....||.|.....|.|||.:||.::     |..
plant   159 TLIDALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRS 223

  Fly   121 LSGYLKSSKVRQVLADLALSQVA--------HKRVEYLNISEARRLAIGIQLVRDPVMLLLDEPT 177
            ||...|.::|:.::..|.|...|        |:.|   :..|.||::||..::.||::|.|||||
plant   224 LSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGV---SGGERRRVSIGNDIIHDPIILFLDEPT 285

  Fly   178 HGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYF 242
            .|||..|||::|.:|...| ::|..:::|:.:|...:...||:.:||..|..||||....:.::|
plant   286 SGLDSTSAYMVIKVLQRIA-QSGSIVIMSIHQPSYRIMGLLDQLIFLSKGNTVYSGSPTHLPQFF 349

  Fly   243 HGIGFPCPQLENPLMYYLCL------STVDRR-------------------SRDRFLESSQQIEA 282
            .....|.|:.||...:.|.|      ||...:                   :..|....|...||
plant   350 SEFKHPIPENENKTEFALDLIRELEYSTEGTKPLVEFHKQWRAKQAPSYNNNNKRNTNVSSLKEA 414

  Fly   283 LVERFSRETPISDAPLNNMGSGKVP--LAYGKPGELKVWVMLYLKLLASTFSCGLVGMKTLFLRL 345
            :....||...:|.| .||..|...|  ..:..|..:::.|:....:|.|.....|:||     ||
plant   415 ITASISRGKLVSGA-TNNNSSNLTPSFQTFANPFWIEMIVIGKRAILNSRRQPELLGM-----RL 473

  Fly   346 LLLPLALSILWAFYTDVGDDSHGFFTKNGMILNILGLS-YGCGILTTISLFPIWRKKFSQDTPEG 409
            ..:.:...||...:|::.:...|...:.|.....:..: |.|.  ..|.:|...|..|.::|...
plant   474 GAVMVTGIILATMFTNLDNSPKGAQERLGFFAFAMSTTFYTCA--EAIPVFLQERYIFMRETAYN 536

  Fly   410 LYSGTTLLIAYNSVSIP-FSAVSAVIASCVVYPLLLDVKYNNGTVFAY--LLVALW--SSFV--- 466
            .|..::.:::.:.:||| ...:||..|:...:.:.|| ...||..|.|  :|.:.|  ||||   
plant   537 AYRRSSYVLSQSIISIPALIVLSASFAATTFWAVGLD-GGANGFFFFYFTILASFWAGSSFVTFL 600

  Fly   467 --LAEQLTIAFLLVVKVPFNAAIAVTYVLVIS 496
              :...:.:.|.:||.:       :.|.|:.|
plant   601 SGVIPNVMLGFTVVVAI-------LAYFLLFS 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 76/240 (32%)
CcmA 31..302 CDD:224054 96/314 (31%)
ABC2_membrane 364..515 CDD:304374 34/144 (24%)
ABCG2NP_181272.1 3a01204 95..754 CDD:273361 147/551 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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