DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and abcg4b

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001104682.1 Gene:abcg4b / 794238 ZFINID:ZDB-GENE-080215-10 Length:644 Species:Danio rerio


Alignment Length:561 Identity:128/561 - (22%)
Similarity:240/561 - (42%) Gaps:71/561 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DYVLEAHNIFH-----TTEVD---------GGGCFNGAGNSALVLKGVNLTVHSGEVMAILGSKG 57
            :::.||....|     |.|::         .|..:...|..|| ||.::....|.|::.|:|..|
Zfish    40 NHITEAQRFSHLPKRTTVELEFKELCYTIREGPWWKKQGYKAL-LKCLSGKFSSRELIGIMGPSG 103

  Fly    58 SGKRALLDVISRRADGATRGQVLLNGSPLSKALFQQRCGYVTQSCTFVPGLTVAQTLHYTPTIL- 121
            :||..|:::::...:....||:|:||.......|::...|:.|....:|.|:|.:.:..:..:. 
Zfish   104 AGKSTLMNILAGYRETGMTGQILVNGKLRDPRTFRKMSCYIMQEDKLLPHLSVQEAMMVSANLKL 168

  Fly   122 --SGYLKSSKVRQVLADLALSQVAHKRVEYLNISEARRLAIGIQLVRDPVMLLLDEPTHGLDPLS 184
              |..:|...::::|..|.|.:..|.|...|:..:.:||||.::||.:|.::..||||.|||..|
Zfish   169 NESSEVKKELIKEILTALGLHECVHTRTVSLSGGQCKRLAIALELVNNPPVMFFDEPTSGLDSAS 233

  Fly   185 AYLLISILSNTAKKTGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPC 249
            .:.::|::.:.| :.|..|:.::.:|.:.:|...|:...|..|..:|.|....::.|..|:|..|
Zfish   234 CFQVVSLMKSLA-QGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIYKGSVPYLIPYLRGLGLHC 297

  Fly   250 PQLENPLMYYLCLSTVDRRSRDRFLESSQQ--IEALVER---FSRETPISDAPLNNMGSGKVPLA 309
            |...||..:.:.:::.:....:..|..:.|  :.||.|:   ..:.|..|.|.......|.|...
Zfish   298 PTYHNPADFIIEVASGEYGDLNPVLFEAVQGGMCALEEKCNCIDKTTVTSCAAKCVKDPGHVESH 362

  Fly   310 YGKPGELKVWVMLYLKLLASTFSCGLVGMKTLFLRLLLLPLALSIL-WAFYTDVGDDSHGFFTKN 373
            ......|..:.:|:.:    ||...........|| |:..:::.:| ...|.::|:|:...|...
Zfish   363 TFATSSLTQFCILFKR----TFITICRDQVLTHLR-LMSHISIGVLIGLLYLNIGNDASKVFNNT 422

  Fly   374 G-MILNILGLSYGCGILTTISLFPIWRKKFSQDTPEGLYSGTTLLIAYNSVSIPFSAVSAVIASC 437
            | :..::|.|.:| .::.|:..||:....|.::.....||.....:|.....|||..:..::...
Zfish   423 GFLFFSMLFLMFG-ALMPTVLTFPLEMAVFLREHLNYWYSLKAYYLAKTMADIPFQVLCPIMYCS 486

  Fly   438 VVYPLLLDVKYNNGTVFAYLLVALW--------SSFVLAEQLTIAFLLVVK----------VPFN 484
            :||                     |        |.::|...|:|...||.:          ....
Zfish   487 IVY---------------------WMTEQPPEASRYLLFLALSICTALVAQSLGLLVGAASTSLQ 530

  Fly   485 AAIAVTYVLVISIALASGTVRSFKGLQPWLQDNTKGTHTRY 525
            .|..|..|..|.:.|.||...:|..:..:||.::..::.||
Zfish   531 VATFVGPVTGIPVLLFSGFFVNFDTIPEYLQWSSYVSYVRY 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 61/234 (26%)
CcmA 31..302 CDD:224054 73/278 (26%)
ABC2_membrane 364..515 CDD:304374 33/169 (20%)
abcg4bNP_001104682.1 3a01204 42..644 CDD:273361 128/559 (23%)
ABCG_EPDR 57..281 CDD:213180 59/225 (26%)
ABC2_membrane 375..574 CDD:279410 46/224 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.