DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and abcg2d

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_009292498.3 Gene:abcg2d / 735310 ZFINID:ZDB-GENE-050517-38 Length:658 Species:Danio rerio


Alignment Length:544 Identity:145/544 - (26%)
Similarity:249/544 - (45%) Gaps:61/544 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HNIFHTTEVDGGGCFNGAGNSALVLKGVNLTVHSGEVMAILGSKGSGKRALLDVISRRADGA-TR 76
            |:|.:..|...|...........:|..:|..:..| :.||||..||||.:.|||::.|.|.| ..
Zfish    43 HSIRYRVEQKTGPVCRRTTVQKEILLDLNGIMRPG-LNAILGPTGSGKSSFLDVLAGRKDPAGLS 106

  Fly    77 GQVLLNGSPLSKALFQQRCGYVTQSCTFVPGLTVAQTLHYTPTI-LSGYL----KSSKVRQVLAD 136
            |:||:||: |..|.|:...|||.|....:..|||.:.|.::..: ||.::    |.::|..::::
Zfish   107 GEVLVNGA-LQPANFKCLSGYVVQDDIVMGTLTVRENLSFSAALRLSSHVSPREKEARVNHLISE 170

  Fly   137 LALSQVAHKRV-----EYLNISEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTA 196
            |.|::||..:|     ..::..|.:|.:||::|:.||.:|.|||||.|||..:|:.::.:|...|
Zfish   171 LGLNKVADSKVGTQIIRGISGGERKRTSIGMELIIDPSVLFLDEPTTGLDASTAHSVLLLLKRMA 235

  Fly   197 KKTGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYL- 260
            .: |..|::|:.:||..::...|....|..|..||.|..:..|:||..||:.|....||..::| 
Zfish   236 GQ-GRTIIMSIHQPRFSIYRLFDSLTLLANGKQVYHGPAQDALDYFSNIGYACEAHNNPADFFLD 299

  Fly   261 -----------------C-LSTVDRRS-RDRFLE---SSQQIEALVERFSRETPISDAPLNNMGS 303
                             | :|.|.|:| .|:.:|   |.....|:...........|:..:::.:
Zfish   300 VINGSSVTKIQNNGDAECDVSAVSRQSVEDQLMEKYRSCSFARAVRAELDHIIQTKDSSSSSVAA 364

  Fly   304 GKVPLAYGKP--GELKVWVMLYLKLLASTFSCGLVGMKTLFLRLLLLPLALSILWAFYTDVGDDS 366
            ....:.|...  .:|: ||      |..||...::..:|...:|.:..|..:|:.|.:..|.||.
Zfish   365 ECHSITYSSSFCQQLR-WV------LWRTFWNLMLNPQTSVAQLAVTTLMAAIVGAIFYGVKDDQ 422

  Fly   367 HGFFTKNGMILNILGLSYGC-GILTTISLFPIWRKKFSQDTPEGLYSGTTLLIA-YNSVSIPFSA 429
            .|...:.|::..|  .:..| ..|:...||...||.|..:...|.|..:...:: ..|..|....
Zfish   423 SGIQNRFGVLFFI--TTNQCFSTLSAAELFITERKLFIHEYTSGYYRVSVFFLSKILSDIITQRT 485

  Fly   430 VSAVIASCVVYPLLLDVKYNNGTVFAYLLVALWSSFVLAEQLTIAFLLVVKVPFNAAIAVTYVLV 494
            :.:|:.||||| .::.:|......|.::|.      |:....|.|.:.:......:.:||..:|:
Zfish   486 IPSVLFSCVVY-FMIGLKPTASAFFIFMLT------VILVSCTAAAMAMAISADQSVVAVANILM 543

  Fly   495 ----ISIALASGTVRSFKGLQPWL 514
                |.:.:.||.:.:.|.:..||
Zfish   544 TVSFIFMMIFSGLLVNLKSIMDWL 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 74/228 (32%)
CcmA 31..302 CDD:224054 91/304 (30%)
ABC2_membrane 364..515 CDD:304374 37/157 (24%)
abcg2dXP_009292498.3 PRK10535 56..658 CDD:333000 141/531 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.