DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11069 and Abcg3

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_038948191.1 Gene:Abcg3 / 498327 RGDID:1565568 Length:703 Species:Rattus norvegicus


Alignment Length:572 Identity:129/572 - (22%)
Similarity:219/572 - (38%) Gaps:130/572 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLEAHNIFHTTEVDGGGCFNG--------AGNSALVLKGVNLTVHSGEVMAILGSKGSGKRALLD 65
            ||..|||.:...|..|.....        :..|.::..|:|         ||:|.:...:..|||
  Rat    81 VLSFHNISYRETVQSGFPLRQQTRVIERLSSISGIMGPGLN---------AIMGPQDGSRSLLLD 136

  Fly    66 VISRRAD-GATRGQVLLNGSPLSKALFQQRCGYVTQSCTFVPGLTVAQTLHYT-----PTILSGY 124
            |::.|.| ....|.:|:||.| ..|.|:...|||.|:...:..:||...|.::     |..::..
  Rat   137 VLAARRDPSGLSGDILVNGKP-RPANFKCTSGYVPQNDVVMHTVTVRDNLEFSAALRLPMTITRD 200

  Fly   125 LKSSKVRQVLADLALSQVAHKRVEYLNISEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLI 189
            .|..::.:||..|.|.:..:.:.....:  .:|.:|.::|:.:..:|.||:||..||..:...:|
  Rat   201 EKRRRINEVLELLHLDKEQNTKPRSKEL--RKRTSIAVELIAEHPILFLDDPTTDLDLTTTTYVI 263

  Fly   190 SILSNTAKKTGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLEN 254
            |:|...:.| |..|:.|:.:|:..:|.|.|....:..|.:::.|..|..||||...|:......|
  Rat   264 SVLRRMSMK-GKTIIFSINQPQYSIFRFFDSLTLVASGKLMFHGPARDALEYFTSAGYQYESHNN 327

  Fly   255 PLMYY-------LCLSTVDRRS----RDRFLESSQQIEALVERFSRETPISD--APLNNMGSGKV 306
            |..::       ||.:..|...    .:.|....|..:.|...:::....||  |.|:.: .|:.
  Rat   328 PADFFLDVINGGLCDTEEDGHEAGNYEELFERKYQATKKLANMYAQSRLHSDTRARLDQL-LGQQ 391

  Fly   307 PLAYGKPGELKVWVMLYLKLLASTFSCG-------LVGMKTLFLRLLLLPL---ALSILWAFYTD 361
            .|......|.......:.:|:..|:...       ||..|...:...|..|   |..||      
  Rat   392 QLDRNSAVETTCVTPFWHQLMWITYQSFKNIRGFLLVTAKQAVITATLAALVGIAFQIL------ 450

  Fly   362 VGDDSHGFFTKNGMILNIL--GLSYGCGI---LTTIS---LFPIWRKKFSQDTPEGLY------- 411
                      |||.|...:  ||.|...|   :|::|   ||.|.|.:|..:...|.|       
  Rat   451 ----------KNGCIEVYIRAGLLYLLTIFQCITSVSAGELFVIDRDRFLHEHTSGYYRVSSYFF 505

  Fly   412 ------------------------SG-------------TTLLIAYNSVSIPFSAVSAVIASCVV 439
                                    :|             |.:::||::.|:|.|..:.  .:.|.
  Rat   506 GKLLAELIPRRLLPSTIVLITYFIAGVKTSMSSFFAMLFTVMMLAYSASSLPLSIGAG--ENAVA 568

  Fly   440 YPLLLDVKYNNGTVFAYLL----VALWSSFVLAEQLTIAFLLVVKVPFNAAI 487
            .|.|....|     |.::|    ::|:|..:|.:...|.:..:....|.|.:
  Rat   569 VPTLFVTIY-----FVFMLFFSGLSLYSGSLLPQLSWIQYFNIPHYGFKALL 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 57/231 (25%)
CcmA 31..302 CDD:224054 73/289 (25%)
ABC2_membrane 364..515 CDD:304374 36/180 (20%)
Abcg3XP_038948191.1 3a01204 109..683 CDD:273361 122/544 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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