DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11069 and st

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster


Alignment Length:524 Identity:133/524 - (25%)
Similarity:224/524 - (42%) Gaps:108/524 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FNGAGNSALVLKGV--NLT--VHSGEVMAILGSKGSGKRALLDVISRRADGAT--RGQVLLNGSP 85
            :...|.|...:|.:  |.|  :..|.:||::||.||||..|:..::.|....|  :|.:|:||..
  Fly    77 YTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRR 141

  Fly    86 LSKALFQQR-CGYVTQSCTFVPGLTVAQTLHYTPTILSGYLKSSK----------VRQVLADLAL 139
            :..  |..| .|||.|...|:..|||.:.|::     ..:|:..:          ::::|....|
  Fly   142 IGP--FMHRISGYVYQDDLFLGSLTVLEHLNF-----MAHLRLDRRVSKEERRLIIKELLERTGL 199

  Fly   140 SQVAHKRV------EYLNISEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKK 198
            ...|..|:      :.|:..|.:|||..::|:.:||:|..||||.|||..||..|::.|...|:|
  Fly   200 LSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQK 264

  Fly   199 TGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYLCLS 263
             |..||.::.:|.|.:|...:..:.|..|.|.::|..:..|.:|...|:.||:..||..:.:.:.
  Fly   265 -GTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVL 328

  Fly   264 TVD-------RRSR----DRFLESS--QQIEALVERFSRETPISDAPLNNMGSGKVP-------- 307
            ..|       :||.    |:|..||  :|.:.||          :..::...||..|        
  Fly   329 ATDPGYEQASQRSAQHLCDQFAVSSAAKQRDMLV----------NLEIHMAQSGNFPFDTEVESF 383

  Fly   308 --LAYGKPGELKVWVMLYLKLLASTFSCGLVGMKTL-FLRLLLLPLALSILWAFYTDVGDDSH-G 368
              :|:.|...: ||:...|.||..         .|: :||.:.......|:.|.:....:.|. |
  Fly   384 RGVAWYKRFHV-VWLRASLTLLRD---------PTIQWLRFIQKIAMAFIIGACFAGTTEPSQLG 438

  Fly   369 FFTKNGMILNILGLSYGCGILTTISLFPIWRKKFSQDTPEGLYSGTTLLIAYNSVSIPFSAVSAV 433
            .....|.:..::..:....:.:.::|||.....|.::|..|||| |....|.|        :.|:
  Fly   439 VQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYS-TGQYYAAN--------ILAL 494

  Fly   434 IASCVVYPLLLDVKYNNGTVFAYLLVALWSSFVLAEQLTIAFLLVVKVPFNAAIAVTYVLVISIA 498
            :...::.||:.       .:..|.|..|.|:|       .||         ...|:..|||:::|
  Fly   495 LPGMIIEPLIF-------VIICYWLTGLRSTF-------YAF---------GVTAMCVVLVMNVA 536

  Fly   499 LASG 502
            .|.|
  Fly   537 TACG 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 68/228 (30%)
CcmA 31..302 CDD:224054 86/306 (28%)
ABC2_membrane 364..515 CDD:304374 32/140 (23%)
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 68/228 (30%)
3a01204 67..665 CDD:273361 133/524 (25%)
ABC2_membrane 395..600 CDD:279410 42/187 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438922
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3467
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

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