DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11069 and Abca14

DIOPT Version :9

Sequence 1:	NP_651307.2	Gene:	CG11069 / 42976	FlyBaseID:	FBgn0039244	Length:	604	Species:	Drosophila melanogaster
Sequence 2:	XP_038957098.1	Gene:	Abca14 / 365362	RGDID:	1561491	Length:	1691	Species:	Rattus norvegicus

Alignment Length:	233	Identity:	64/233 - (27%)
Similarity:	121/233 - (51%)	Gaps:	18/233 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 NSALV-LKGVNLTVHSGEVMAILGSKGSGKRALLDVISRRADG---ATRGQVLLNGSPLSKALFQ 92
            ||.|: :|.::|.::.|::..:||..|:||...|.:::    |   .|:|:|.::|..:|..:.|
  Rat   544 NSTLMAVKDLSLNLYEGQITVLLGHNGAGKTTTLSILT----GLYLPTKGKVYISGYDISSDMVQ 604

  Fly    93 QR--CGYVTQSCTFVPGLTVAQTLHYTPTILSGYLKSSKVRQV---LADLALSQVAHKRVEYLNI 152
            .|  .|...|.....|.|||::.|::. .::.|...:::.|::   |....|.|.::...:.|:.
  Rat   605 VRKSLGLCPQDDLLFPLLTVSEHLYFY-CVIKGISSTNRPREIHRMLTSFGLLQKSNTMSKDLSG 668

  Fly   153 SEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPF 217
            ...|:|:|.|.|:.|..:::|||||.|:||:|...:..:|.: .||....:|.:.....:||..
  Rat   669 GMKRKLSIIIALIGDTKVVILDEPTSGMDPVSRRAIWDLLQH-YKKDRTILLTTHHMDEADVLG- 731

  Fly   218 LDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENP 255
             ||...|.: ||:...|:...|:..:|:|:....::.|
  Rat   732 -DRIAILVM-GVLKCCGSSLFLKKLYGVGYHLVIVKTP 767

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11069	NP_651307.2	ABCG_White	15..233	CDD:213201	59/209 (28%)
		CcmA	31..302	CDD:224054	64/233 (27%)
		ABC2_membrane	364..515	CDD:304374
Abca14	XP_038957098.1	rim_protein	<100..1681	CDD:130324	64/233 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000