DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11069 and Abcg4

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001100286.2 Gene:Abcg4 / 300664 RGDID:1305840 Length:646 Species:Rattus norvegicus


Alignment Length:649 Identity:148/649 - (22%)
Similarity:261/649 - (40%) Gaps:118/649 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DYVLEAHNIFH--------------TTEVDGGGCFNGAGNSALVLKGVNLTVHSGEVMAILGSKG 57
            :::.||....|              :..|..|.|:...|...| ||.::......|::.|:|..|
  Rat    42 NHITEAQRFSHLPKRSAVDIEFVELSYSVREGPCWRKRGYKTL-LKCLSGKFCRRELIGIMGPSG 105

  Fly    58 SGKRALLDVISRRADGATRGQVLLNGSPLSKALFQQRCGYVTQSCTFVPGLTVAQTLHYTPTILS 122
            :||...:::::...:...:||:|:||.|.....|::...|:.|....:|.|||.:.:     ::|
  Rat   106 AGKSTFMNILAGYRESGMKGQILVNGRPRDLRTFRKMSCYIMQDDMLLPHLTVLEAM-----MVS 165

  Fly   123 GYLKSSK--------VRQVLADLALSQVAHKRVEYLNISEARRLAIGIQLVRDPVMLLLDEPTHG 179
            ..||.|:        |.::|..|.|...:|.|...|:..:.:||||.::||.:|.::..||||.|
  Rat   166 ANLKLSEKQEVKKELVTEILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSG 230

  Fly   180 LDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYFHG 244
            ||..|.:.::|::.:.| ..|..::.::.:|.:.:|...|:...|..|..::.|....::.|..|
  Rat   231 LDSASCFQVVSLMKSLA-HGGRTVICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKG 294

  Fly   245 IGFPCPQLENPLMYYLCLSTVDRRSRDRFLESSQQ--IEALVERFSRETPISDAPLNNMGSGKVP 307
            :|..||...||..:.:.:::.:....:..|..:.|  :..:.|:.|       :|..|......|
  Rat   295 LGLHCPTYHNPADFIIEVASGEYGDLNPMLFRAVQNGLCTMAEKKS-------SPEKNEVPAHCP 352

  Fly   308 LAYGKPGELK-----------------VWVMLYLKLLASTFSCGLVGMKTLFLRLLLLPLALSIL 355
            ..   |.||.                 ::...:|.:|..|....|     .|:..:|:.:.:.:|
  Rat   353 TC---PPELDPIESHTFATSTLTQFCILFRRTFLSILRDTVLTHL-----RFMSHVLIGVLIGLL 409

  Fly   356 WAFYTDVGDDSHGFFTKNG-MILNILGLSYGCGILTTISLFPIWRKKFSQDTPEGLYSGTTLLIA 419
               |..:|||:...|...| :..::|.|.: ..::.|:..||:....|.::.....||.....:|
  Rat   410 ---YLHIGDDASKVFNNTGFLFFSMLFLMF-AALMPTVLTFPLEMAVFMREHLNYWYSLKAYYLA 470

  Fly   420 YNSVSIPFSAVSAVIASCVVYPLLLDVKYNNGTVFAYLLVALW--------SSFVLAEQLTIAFL 476
            .....:||..|..|:...:||                     |        |.|:|...|:||..
  Rat   471 KTMADVPFQVVCPVVYCSIVY---------------------WMTGQPAETSRFLLFSALSIATA 514

  Fly   477 LVVK----------VPFNAAIAVTYVLVISIALASGTVRSFKGLQPWLQDNTKGTHTRYA-SSLL 530
            ||.:          .....|..|..|..|.:.|.||...|||.:..:||.::..::.||. ..|:
  Rat   515 LVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSSYLSYVRYGFEGLI 579

  Fly   531 HSIAFQSR-KLNCTPTASVICP--KPADFMHERLGLPDPDETIDVAASCAFAVGLAAFNMLVYL 591
            .:|....| .|.|....   ||  .|...:||.    |.:|...........:...|..:|.||
  Rat   580 LTIYGMERGHLTCLEDH---CPFRDPQIILHEL----DVEEAKLYMDFLVLGIFFLALRLLAYL 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 61/239 (26%)
CcmA 31..302 CDD:224054 71/280 (25%)
ABC2_membrane 364..515 CDD:304374 38/169 (22%)
Abcg4NP_001100286.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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