DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11069 and abcx-1

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_495321.3 Gene:abcx-1 / 183860 WormBaseID:WBGene00006522 Length:710 Species:Caenorhabditis elegans


Alignment Length:631 Identity:144/631 - (22%)
Similarity:259/631 - (41%) Gaps:115/631 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VLK----GVNLTVHSGEVMAILGSKGSGKRALLDVISRRAD--GATRGQVLLNGSPLSKALFQQR 94
            |||    .::..:.|.:|:||:.:|.|...:||.:|....|  |...|.:|:||..:|:...::.
 Worm    95 VLKQEVHNISFELSSSDVLAIMYTKESETISLLKIICGIKDVRGKLSGDILVNGHRMSRDRLEKT 159

  Fly    95 CGYVT-QSCTFVPGLTVAQTLH-----YTPTILS----GYLKSSKVRQVLADLALSQVAHKRVEY 149
            .|:|: :|.|..  |:|.|.||     |.|....    |:|    :.:::.||.|..|:......
 Worm   160 IGFVSLESPTST--LSVRQYLHVHGNFYPPMTERYGGVGHL----INKLMTDLGLFPVSDIICSR 218

  Fly   150 LNISEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDV 214
            ||.|:.:|:.:..||||||.:|:..:....:|......||..|...|.||...:::::......:
 Worm   219 LNRSQWQRVKVASQLVRDPTILVCSDIFKDIDVHDQCFLIDYLREWAVKTNRIVIMAISPTSLQI 283

  Fly   215 FPFLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYLCLSTVDRRSRDRFLESSQQ 279
            .....:|:.|..|.::|.|..::|.:||..||.|||..:|...||:.|.|.|..:.|...|||.:
 Worm   284 LNMFSKAMILASGRMIYFGPPKSMQQYFETIGCPCPPYKNVCDYYVDLVTHDNLTSDASRESSVR 348

  Fly   280 IEALVERFSRETPISDAPLNNMGSGKVPLAYGKPGELKVWVMLYLKLLASTFSCGLVGMKTLFLR 344
            |..||.::::..|    |:....|||..|.....|     :.:.|..|.|.|....:..:...:.
 Worm   349 IARLVNKWNQTAP----PVRRTASGKFLLDLPTAG-----IFMNLLTLISLFWFNFINNRASRIF 404

  Fly   345 LLLLPLALSILWAFYTDVGDDS----HGFFTKNG----------MILNILGLSYGCGILTTISLF 395
            .||...:||...:.:  :.|.|    ..|..:|.          :.:.::.|. .|..|:....|
 Worm   405 FLLFIFSLSTCLSLH--LSDLSLTLPDAFLNRNSYLELLIFYVPLFIGLVNLK-KCTFLSEFDKF 466

  Fly   396 PIW------RKKFSQDTP-EGLYSGTTLLIAYNSVSIPFSAVSAVIASCVVYPLLLDVKYNNGTV 453
            .::      .|:..:.:| :.:.|..:::|....|.:||..::::                   |
 Worm   467 YLFISARHHLKELLKLSPLKNMCSSLSIIIVSFVVELPFLLITSM-------------------V 512

  Fly   454 FAYLLVALWSSFVLAEQLTIAFLLVVKVPFNAAIAVTYVLVISIALASGTVRSF----------- 507
            || :.:::::.|.......:..|:.:...|...::||.::|.|::..|....||           
 Worm   513 FA-MPMSIFTDFHQKSSNHLTSLVSISSSFFINLSVTQLVVNSVSNLSSEPLSFFFFVISWFSLF 576

  Fly   508 -------------KGLQP----------WLQDNTKGTHTRYASSLLHSIAFQS---RKLNCTPTA 546
                         |...|          :|.:::...:.:.:.:|...|...|   ..||.|...
 Worm   577 FACGFPFPIHSILKYFNPLFFPTTSVFRFLYEDSPSLYPQLSVNLSTPIQLYSCGRTFLNTTQVT 641

  Fly   547 SVICPKPADFMHERLGLPDPDETIDVAASCAFAVGLAAFNMLVYLF 592
            ...|.|.:.|  |.|.....:|:.|...|....:.::.| :..|||
 Worm   642 RGPCQKVSSF--ELLSYYGFNESFDKQKSIFHGILISNF-IFNYLF 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 58/212 (27%)
CcmA 31..302 CDD:224054 82/281 (29%)
ABC2_membrane 364..515 CDD:304374 30/205 (15%)
abcx-1NP_495321.3 P-loop_NTPase 102..302 CDD:304359 55/205 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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