DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and abch-1

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_495320.1 Gene:abch-1 / 174078 WormBaseID:WBGene00016973 Length:595 Species:Caenorhabditis elegans


Alignment Length:576 Identity:164/576 - (28%)
Similarity:257/576 - (44%) Gaps:85/576 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YVLEAHNIFHTTEVDGGGCFNGAGNSALV---LKGVNLTVHSGEVMAILGSKGSGKRALLDVISR 69
            :|||..:|...|.:..|..|:.......|   ||.::.|..|||:.||:|...|||..||:.::.
 Worm     5 HVLECKSISFMTAISNGTWFSKIYKPPSVFQILKNISFTATSGEIHAIVGVADSGKTTLLEALTS 69

  Fly    70 RADGATRGQVLLNGSPLSKALFQQRCGYVTQSCTFVPGLTVAQTLHYTPTI-LSGYLKSSKVRQV 133
            .|.|...|..:|:...|::..|.:.|.::.....:...|:|...|:|...: ||....|.::...
 Worm    70 GAGGDIGGIAMLDKFMLTRRRFNKFCSHINYRNQYPSSLSVRSLLYYHARLCLSSTHTSLEIDHR 134

  Fly   134 LADL-ALSQV---AHKRVEYLNISEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSN 194
            :::| |:..|   ||.::|.|:.|..||:...::|::||::.::|:||..|.|||||.||..|..
 Worm   135 ISELSAMFDVIGYAHDKLEDLSFSARRRVMTVMELLKDPILTIIDDPTAYLSPLSAYQLIYALHF 199

  Fly   195 TAKKTGCGILLSLEKPRSDVFPFLDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYY 259
            .|.|....|:::|...|||:...|..|..|..|.|.|||..|.:..:|...||.||..|||..||
 Worm   200 YAAKFNRIIIITLRNVRSDLSHLLGSATCLFYGEVAYSGQMRLLPNHFKKAGFECPPNENPAAYY 264

  Fly   260 LCLSTVDRRSRDRFLESSQQIEALVE-RFSRETPISDAPLNNMGSGKVPLAYGK--PGELKVWVM 321
            |.|.|:|:.|..:.:|:.::...||. |...:|....:..:..|:| |.|..|:  |....|..:
 Worm   265 LSLLTIDKESMQKVMETQEKATKLVAFRTDNDTSSDISGSSATGTG-VLLDSGRKNPSISTVAAI 328

  Fly   322 LY---LKLLASTFSCGLVGMKTLFLRLLLLPLALSILWAFYTDVGDDSHGFFTKNGMILNILGLS 383
            |:   |.|:.||.|..|.|       |:..|:..::| :|.......|..||.|   :|..|.| 
 Worm   329 LFRRVLSLIGSTPSNSLAG-------LIAFPVTAAVL-SFLRPTSLPSSLFFWK---LLTFLYL- 381

  Fly   384 YGCGILTTISLFPIWRKKFSQDTPE-GLYSGTTLLIAYNSVSIPFSAV-SAVIASCVVYP----- 441
                :|.||.:||.:.|.......| .||..||.|..::...:.:|.: |::....|::.     
 Worm   382 ----LLQTIVIFPNYSKTSLLSFRECNLYCQTTSLTIFSIFFLVYSCIQSSLFVGIVLWSFKSEA 442

  Fly   442 ---------LLLDVKYNNGTVFA-YL-----LVALWSSFVLA------------EQLTIAFLLVV 479
                     ||....::..|:.| ||     :|.|.:..:||            ...:|.:.:.|
 Worm   443 MFQISLNLFLLSIFSFSIFTICARYLKNCSNIVILQTIIILAFFVSGNGVTGTTTSSSIQYYIGV 507

  Fly   480 KVPFNAAIAVTYVLVISIALASGTVRSFKGLQPWLQDNTKGTHTRYASSL---LHS 532
            ..|||      |...:...|.|.::           ||.:.|...|...|   |||
 Worm   508 INPFN------YSNFLLSKLLSSSI-----------DNEECTFPSYMCKLSMNLHS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 71/225 (32%)
CcmA 31..302 CDD:224054 90/279 (32%)
ABC2_membrane 364..515 CDD:304374 40/184 (22%)
abch-1NP_495320.1 P-loop_NTPase 18..238 CDD:393306 69/219 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165238
Domainoid 1 1.000 85 1.000 Domainoid score I5247
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I2942
Isobase 1 0.950 - 0 Normalized mean entropy S3467
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007488
OrthoInspector 1 1.000 - - oto18164
orthoMCL 1 0.900 - - OOG6_109019
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2367
SonicParanoid 1 1.000 - - X10207
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.730

Return to query results.
Submit another query.