DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11069 and Abcg8

DIOPT Version :10

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_569098.2 Gene:Abcg8 / 155192 RGDID:620300 Length:672 Species:Rattus norvegicus


Alignment Length:616 Identity:161/616 - (26%)
Similarity:263/616 - (42%) Gaps:120/616 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LVLKGVNLTVHSGEVMAILGSKGSGKRALLDVISRRADGA--TRGQVLLNGSPLSKALFQQRCGY 97
            |.::.::..|.||:::||:||.|.|:..|||||:.|..|.  ..||:.:||.|.:..|.|:...:
  Rat    86 LGIRNLSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMKSGQIWINGQPSTPQLIQKCVAH 150

  Fly    98 VTQSCTFVPGLTVAQTLHY-----TPTILSGYLKSSKVRQVLADLALSQVAHKRVEYLNI----- 152
            |.|....:|.|||.:||.:     .|...|...:..:|..|:|:|.|.|.|:.||....:     
  Rat   151 VRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSG 215

  Fly   153 SEARRLAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPF 217
            .|.||::||:||:.:|.:|:|||||.|||..:|:.|:..||..||.... :|:||.:||||:|..
  Rat   216 GERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAKGNRL-VLISLHQPRSDIFRL 279

  Fly   218 LDRALFLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYLCLSTVDRRSRDRFLESSQQIEA 282
            .|..|.:..|..:|.|..:.|::||..||:|||:..||..:|:.|:::||||:::.:.:.::...
  Rat   280 FDLVLLMTSGTPIYLGVAQHMVQYFTSIGYPCPRYSNPADFYVDLTSIDRRSKEQEVATMEKARL 344

  Fly   283 LVERFSRETPISD-----APLNNMGSGKVPLAY--------GKPGELKVWVMLYLKLLASTFSCG 334
            |...|..:....|     |...::.:|...::.        |...||...:..:..|:....|..
  Rat   345 LAALFLEKVQGFDDFLWKAEAKSLDTGTYAVSQTLTQDTNCGTAAELPGMIQQFTTLIRRQISND 409

  Fly   335 LVGMKTLFLRLLLLPLALSILWAFYTDVGDDSHGFFTKNGMILNILG-LSYGCGILTTISLFPIW 398
            ...:.|||:                       ||  .:..::..|:| |.||             
  Rat   410 FRDLPTLFI-----------------------HG--AEACLMSLIIGFLYYG------------- 436

  Fly   399 RKKFSQDTPEGLYSGTTLLIAYNSVSIPFSAVSAVIASC-----VVYPLLLDVKYNNGTVF---- 454
                ..|.|........||....:: |||:.:..|::.|     ::|..|.|..|..|..|    
  Rat   437 ----HADKPLSFMDMAALLFMIGAL-IPFNVILDVVSKCHSERSLLYYELEDGLYTAGPYFFAKV 496

  Fly   455 --------AYLLVALWSSFVLA------EQLTIAFLLVVKVPF---NAAIAVTYVLVI------- 495
                    ||:::.....:.|.      |...:.|:|:..|.|   ..|:|.:.:|..       
  Rat   497 LGELPEHCAYVIIYGMPIYWLTNLRPGPELFLLHFMLLWLVVFCCRTMALAASAMLPTFHMSSFC 561

  Fly   496 ------SIALASGTVRSFKGL---QPWLQDNTKGTHTRYASSLLHSIAFQSRKLNCTPTASVICP 551
                  |..|.:|.:.:...|   ..|:   :|.:..|:..|.|..|.|... :..|...::...
  Rat   562 CNALYNSFYLTAGFMINLNNLWIVPAWI---SKMSFLRWCFSGLMQIQFNGH-IYTTQIGNLTFS 622

  Fly   552 KPADFMHERLGLPDPD----ETIDVAASCAF 578
            .|.|.|...:.|....    ..|.:..||.|
  Rat   623 VPGDAMVTAMDLNSHPLYAIYLIVIGISCGF 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 78/209 (37%)
ABC2_membrane 364..515 CDD:473876 38/193 (20%)
Abcg8NP_569098.2 ABCG_White 60..295 CDD:213201 78/209 (37%)
3a01204 88..662 CDD:273361 160/614 (26%)

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