DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11069 and Abcg1

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_033723.1 Gene:Abcg1 / 11307 MGIID:107704 Length:666 Species:Mus musculus


Alignment Length:579 Identity:133/579 - (22%)
Similarity:240/579 - (41%) Gaps:95/579 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VLKGVNLTVHSGEVMAILGSKGSGKRALLDVISRRADGATRGQVLLNGSPLSKALFQQRCGYVTQ 100
            :|||::...:|||::||:|..|:||..|:::::...:...:|.||:||.|.....|::...|:.|
Mouse   100 LLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRETGMKGAVLINGMPRDLRCFRKVSCYIMQ 164

  Fly   101 SCTFVPGLTVAQTLHYTPTILSGYLKSSK--------VRQVLADLALSQVAHKRVEYLNISEARR 157
            ....:|.|||.:.:     ::|.:||..:        |:::|..|.|...|:.|...|:..:.:|
Mouse   165 DDMLLPHLTVQEAM-----MVSAHLKLQEKDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKR 224

  Fly   158 LAIGIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPFLDRAL 222
            |||.::||.:|.::..||||.|||..|.:.::|::...| :.|..|:.::.:|.:.:|...|:..
Mouse   225 LAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLA-QGGRSIVCTIHQPSAKLFELFDQLY 288

  Fly   223 FLCLGGVVYSGGTRAMLEYFHGIGFPCPQLENPLMYYLCLSTVDRRSRDRFLESSQQIEALVE-- 285
            .|..|..||.|....::.|...:|..||...||..:.:.:::.:...     ::|:.:.|:.|  
Mouse   289 VLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHNPADFVMEVASGEYGD-----QNSRLVRAVREGM 348

  Fly   286 ---RFSRETPISDAPLNNMGSGKVPLAYGKPGELKVWVMLYLKLLASTFSCG------LVGMKTL 341
               .:.|:.. .|..:|       |..:.:|.|         :..||...|.      |.....|
Mouse   349 CDADYKRDLG-GDTDVN-------PFLWHRPAE---------EDSASMEGCHSFSASCLTQFCIL 396

  Fly   342 FLRLLLLPLALSIL---------------WAFYTDVGDDSHGFFTKNG-MILNILGLSYGCGILT 390
            |.|..|..:..|:|               ...|..:|:::....:.:| :..::|.|.: ..::.
Mouse   397 FKRTFLSIMRDSVLTHLRITSHIGIGLLIGLLYLGIGNEAKKVLSNSGFLFFSMLFLMF-AALMP 460

  Fly   391 TISLFPIWRKKFSQDTPEGLYSGTTLLIAYNSVSIPFSAVSAVIASCVVYPLLLDVKYNNGTVFA 455
            |:..||:....|.::.....||.....:|.....:||..:..|....:||.:   ....:..|..
Mouse   461 TVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPFQIMFPVAYCSIVYWM---TSQPSDAVRF 522

  Fly   456 YLLVALWSSFVLAEQLTIAFLLVVKVPFNAAIAVTYVLVISIALASGTVRSFKGLQPWLQDNTKG 520
            .|..||.:...|..|.....:.........|..|..|..|.:.|.||...||..:..:||..:..
Mouse   523 VLFAALGTMTSLVAQSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFDTIPAYLQWMSYI 587

  Fly   521 THTRYA-SSLLHSIAFQSRKLNCTPTASVICPKPADFMHERLGLPDPDETIDVAASCAF 578
            ::.||. ..::.||                           .||...|...|:|.:|.|
Mouse   588 SYVRYGFEGVILSI---------------------------YGLDREDLHCDIAETCHF 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 62/204 (30%)
CcmA 31..302 CDD:224054 75/278 (27%)
ABC2_membrane 364..515 CDD:304374 30/151 (20%)
Abcg1NP_033723.1 3a01204 60..666 CDD:273361 133/579 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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