DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11069 and abca10

DIOPT Version :9

Sequence 1:NP_651307.2 Gene:CG11069 / 42976 FlyBaseID:FBgn0039244 Length:604 Species:Drosophila melanogaster
Sequence 2:XP_031750511.1 Gene:abca10 / 100485734 XenbaseID:XB-GENE-6464279 Length:1610 Species:Xenopus tropicalis


Alignment Length:659 Identity:132/659 - (20%)
Similarity:225/659 - (34%) Gaps:221/659 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LKGVNLTVHSGEVMAILGSKGSGKRALLDVISRRADGATRGQVLLNGSPLSK----ALFQQRCGY 97
            |:.::|.::.|::.|:||..|:||..||:::|.... .:.|...:....||.    ...::|.|:
 Frog   496 LRDLDLNIYEGQITALLGHSGAGKTTLLNILSGMCP-TSGGSATVCNYKLSNMRHLGEIKKRVGF 559

  Fly    98 VTQSCTFVPGLTVAQTLHYTPTI--LSGYLKSSKVRQVLADLALSQVAHKRVEYLNISEARRLAI 160
            ..|.......|||.:.|.....|  :.....:.||:.||:||.::.:.:.....|:..:.|:|..
 Frog   560 CPQGDIKFDPLTVKENLTVFAMIKGIPSKEVAHKVQTVLSDLQMNDIENIEASKLSGGQKRKLTF 624

  Fly   161 GIQLVRDPVMLLLDEPTHGLDPLSAYLLISILSNTAKKTGCGILLSLEKPRSDVFPFLDRALFLC 225
            ||.::.||.:|||||||.||||.|.:.:.:||..:  |.....|||.:        |:|.|..|.
 Frog   625 GIAILGDPQVLLLDEPTAGLDPCSRHNIWTILKES--KADRVTLLSTQ--------FMDEADILA 679

  Fly   226 LGGVVYSG------GTRAMLEYFHGIGF-----------------------PCPQL----ENPLM 257
            ...||.|.      ||...|:...|:|:                       |..:|    |..|.
 Frog   680 DRKVVISKGKLKCVGTSLFLKRKWGVGYHLRMQVSPSCDVELMTSIIKQHIPSTKLTTQNEEELT 744

  Fly   258 YYL----------------------------CLSTVDRRSRDRF--LESSQQIEA---------- 282
            |.|                            .::|:|    |.|  ||...:||:          
 Frog   745 YTLPFENMDVFPDLFLHLDGQVGNSIVNYGVSMTTLD----DVFLKLEGEGEIESGDYDVFNPES 805

  Fly   283 --LVERFSRETPISDAPLNNMGSGKVPLAYGKPGELKVWVMLYLKLLASTFSCGLVGMKTLFLRL 345
              ..:|....|.:.::.|....||.|.|:..:....:|..:..::||.............|.|.:
 Frog   806 RTNEDREDFSTEMEESLLQMSDSGNVTLSGWELWRQQVLAVARIRLLKLRHDTKSFRSILLLLVV 870

  Fly   346 LLLPLALSIL----------W----------------AFYTDV------GDDSHGF--------- 369
            :.||..:.|:          |                .:|||:      |.....|         
 Frog   871 ITLPPIIIIITSNIVNTFDAWELTPHLYFQSPRNRLNKYYTDLLICNNTGSSIEDFVGAVKEQNI 935

  Fly   370 ---------------------------------------FTKNGMILNILGLSYGCGILTTISLF 395
                                                   |....::|||:..:. ..||.....|
 Frog   936 EVQVVNGEYDTETVKYRGAIEVSQMEKGYNFTIVANPKAFNSLPVLLNIISNAL-LKILKVSGHF 999

  Fly   396 PIWRKKFSQDTPEGL---YSGTTLLIAYNSVSIPFSAVSA------------------------- 432
            .:|....:.|..:.:   |......|.:.|...|..|:|:                         
 Frog  1000 RVWNHPITTDGTDIIFLPYMSLIFFIIFASAFCPHIAMSSTEDNRINARNQLRISGLFPSAYWFG 1064

  Fly   433 -VIASCVVYPLLLDVKYNNGTVFAYLLVALW---SSFVLAEQLTIAFLLVVKVPFNAAIAVTYVL 493
             .:...::|.:||           :|:||::   :|::|.:.:....:::..:.:..|: |.||.
 Frog  1065 QALVDVILYWILL-----------FLMVAIYFAFNSYILLDFVPAMVMIIGIIGYGTAM-VLYVY 1117

  Fly   494 VISIALASG 502
            |||.....|
 Frog  1118 VISFIFGRG 1126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11069NP_651307.2 ABCG_White 15..233 CDD:213201 60/201 (30%)
CcmA 31..302 CDD:224054 83/345 (24%)
ABC2_membrane 364..515 CDD:304374 32/219 (15%)
abca10XP_031750511.1 rim_protein <107..1597 CDD:130324 132/659 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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