DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31121 and ABCG4

DIOPT Version :9

Sequence 1:NP_733058.1 Gene:CG31121 / 42975 FlyBaseID:FBgn0051121 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_194305.1 Gene:ABCG4 / 828680 AraportID:AT4G25750 Length:577 Species:Arabidopsis thaliana


Alignment Length:626 Identity:150/626 - (23%)
Similarity:268/626 - (42%) Gaps:117/626 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 LRGVSMQAKAGDLFAIMATSQREGSALAECLAGLTERLGGEILINGQQVSRRGLRELCSYVPALE 383
            ||.:::.:....:.||:..|....|.|.:.||..|....|.||:|...::....|::.||||  :
plant    31 LRNITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPTSGSILLNSVLINPSSYRKISSYVP--Q 93

  Fly   384 VSSLDPRMSVQCTLNFHAALRGPIDRSDLEERMDVLIEDLGLNTVRASNVST-LTHSEKQRLSVA 447
            ..:..|.::|..|..|.|:|..|.:.|.:...:..|:::|.|..:..:.:.. |:..|::|:|:.
plant    94 HDTFFPLLTVSETFTFSASLLLPKNLSKVSSVVASLLKELNLTHLAHTRLGQGLSGGERRRVSIG 158

  Fly   448 CQLLAQSSLLILDQVTSNMDIFDTFFLVEYLRQWC-SGGRIVIMTLQPPTFEILSMCSGVLLLSG 511
            ..||....:|:||:.||.:|....|.:|:.|:... |..||||:::..|:|:|||:...|||||.
plant   159 LSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIATSRERIVILSIHQPSFKILSLIDRVLLLSK 223

  Fly   512 GRTVFSGSRADLPRHMGELGYPCPPFKNPADYYLDLVTLDDLSAAAMLESSARIESLANAWDQIN 576
            |..|:.|....|...:...|:..|...|..:|.:::                 ::::.:.::..|
plant   224 GTIVYHGRLDLLEAFLLSKGFTVPSQLNSLEYAMEI-----------------LQNIRDPYENAN 271

  Fly   577 SEPPLAAPPASLPN-----FTMKAGFFGQISALIKRF--AGYKQPGSLLTWISKLIAAAVLSLFI 634
            ...|...|.:...|     ...|:....:||.|..||  ..|:....|||   .::.:.|:.|.:
plant   272 IALPDHCPESKKQNQKQSIVRYKSSRITEISLLSSRFWKIIYRTRQLLLT---NILESLVVGLVL 333

  Fly   635 GCIFWDVPASDPQLSYHDRLGYHHCVMVLVYWPLVMLTIRDTQ------EDRRHAERDIRLGLYT 693
            |.|:.::......:  ..|.|       |..:.|..|....||      ::|....|:...|||.
plant   334 GTIYLNIGTGKEGI--RKRFG-------LFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYR 389

  Fly   694 RSLYIIVQSLLGLFPSLCIWLAYLLPAHSMAGLYTYSNSSDTGIYLYMG---------YMLLYLT 749
            .|.:|:..:|        ::|.|||   .:|.:|:.|      :|..:|         |.:|.:.
plant   390 LSSHILANTL--------VFLPYLL---LIAIIYSVS------LYFLVGLCFSWQALAYFVLVIW 437

  Fly   750 LIQTLA----LFCAHLLPCKVSASIVNGLISLAVAAVGGYLVHPQNLAQFWSWLQFVSPERWLLP 810
            :|..:|    ||.:.|.|..::.:....::..|.....||.:..::|.::|.::.|.|..::.|.
plant   438 IIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALD 502

  Fly   811 VLVQDEYSAETLSNSAGLQLCRNKQVQHQEIIVQQPCPPPNGTQVLVDFE-------LLPQQHVL 868
            .|:.:|||.           ..||            |        ||.||       |:....||
plant   503 ALLINEYSC-----------LHNK------------C--------LVWFEEASVNSCLVTGGDVL 536

  Fly   869 DPTPTYDQTT--SVALVLGSVLVFCV-TFIVFLCNCRGACR 906
            |....:::..  :|.::||..:::.| .|:|.|....|:.|
plant   537 DKNGLHERQRWFNVYMLLGFFVLYRVLCFLVLLKRVSGSKR 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31121NP_733058.1 P-loop_NTPase 319..518 CDD:304359 62/200 (31%)
cbiO 319..491 CDD:130234 50/173 (29%)
ABC2_membrane 621..809 CDD:279410 43/206 (21%)
ABCG4NP_194305.1 3a01204 30..572 CDD:273361 148/619 (24%)
P-loop_NTPase 30..230 CDD:304359 62/200 (31%)
ABC2_membrane 304..507 CDD:279410 52/231 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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