DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31121 and Abcg5

DIOPT Version :9

Sequence 1:NP_733058.1 Gene:CG31121 / 42975 FlyBaseID:FBgn0051121 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_446206.2 Gene:Abcg5 / 114628 RGDID:620298 Length:652 Species:Rattus norvegicus


Alignment Length:652 Identity:142/652 - (21%)
Similarity:278/652 - (42%) Gaps:114/652 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 GHNPGSRKQSGMGLIYPNIQVH-----CLDVNPC--------LRGVSMQAKAGDLFAIMATSQRE 341
            |...||..:..:|::..:..|.     ..::..|        |:.||:..::|....|:.:|...
  Rat    28 GSVTGSEARHSLGVLNVSFSVSNRVGPWWNIKSCQQKWDRKILKDVSLYIESGQTMCILGSSGSG 92

  Fly   342 GSALAECLAGLTERLG---GEILINGQQVSRRGLRELCSYVPALEV--SSLDPRMSVQCTLNFHA 401
            .:.|.:.::|...|.|   ||:.:||.::.|...::..||:...:|  |||    :|:.||.:.|
  Rat    93 KTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCVSYLLQSDVFLSSL----TVRETLRYTA 153

  Fly   402 ALRGPIDRSDL-EERMDVLIEDLGLNTVRAS-----NVSTLTHSEKQRLSVACQLLAQSSLLILD 460
            .|......:|. :::::.::.:|.|:.|...     |...::..|::|:|:|.|||....:::||
  Rat   154 MLALRSSSADFYDKKVEAVLTELSLSHVADQMIGNYNFGGISSGERRRVSIAAQLLQDPKVMMLD 218

  Fly   461 QVTSNMDIFDTFFLVEYLRQWCSGGRIVIMTLQPPTFEILSMCSGVLLLSGGRTVFSGSRADLPR 525
            :.|:.:|......:|..|.:.....||||:|:..|..|:......:.:|:.|..||.|:..::..
  Rat   219 EPTTGLDCMTANHIVLLLVELARRNRIVIVTIHQPRSELFHHFDKIAILTYGELVFCGTPEEMLG 283

  Fly   526 HMGELGYPCPPFKNPADYYLDLVTLDDLSAAAMLESSARIESLANAWDQI--------NSEPPLA 582
            .....|||||...||.|:|:||.::|..|....:|:..|::.|.:|:.|.        |.|....
  Rat   284 FFNNCGYPCPEHSNPFDFYMDLTSVDTQSREREIETYKRVQMLESAFRQSDICHKILENIERTRH 348

  Fly   583 APPASLPNFTMK--AGFFGQISALIKRFAGYKQPGSLLTWISKLIAAAVLSLFIGCIFWDVPASD 645
            .....:..|..|  .|.|.::..|::|..........:. |.:|:...::.||:  ||:.:...:
  Rat   349 LKTLPMVPFKTKNPPGMFCKLGVLLRRVTRNLMRNKQVV-IMRLVQNLIMGLFL--IFYLLRVQN 410

  Fly   646 PQL--SYHDRLG----------YHHCVMVLVYWPLVMLTIRDTQEDRRHAERDIRLGLYTRSL-Y 697
            ..|  :..||:|          |...:..:..:|::........:|..:.:..:.|.....:| :
  Rat   411 NMLKGAVQDRVGLLYQLVGATPYTGMLNAVNLFPMLRAVSDQESQDGLYQKWQMLLAYVLHALPF 475

  Fly   698 IIVQSLLGLFPSLCIWLAYLLPAHSMAGLYTYSNSSDTGIYLYMGYMLL-------YLTLIQTLA 755
            .||.::  :|.|:|.|...|.|..:..|              |....||       :|||:    
  Rat   476 SIVATV--IFSSVCYWTLGLYPEVARFG--------------YFSAALLAPHLIGEFLTLV---- 520

  Fly   756 LFCAHLLPCKVSASIVNGLISLAVAAVGGYLVHP---QNLAQF---WSWLQFVSPERWLLPVLVQ 814
                 ||....:.:|||.::  |:.::.|.|:..   :|:.:.   ...|.:.:.:::...:||.
  Rat   521 -----LLGMVQNPNIVNSIV--ALLSISGLLIGSGFIRNIEEMPIPLKILGYFTFQKYCCEILVV 578

  Fly   815 DEY---------SAETLSNSAGLQLCRNKQ-VQHQEIIVQQPCPPPNG---TQVLVDFELLPQQH 866
            :|:         |..::.|:   .:|...| :|    .:::.||....   |..|:.:..:|...
  Rat   579 NEFYGLNFTCGGSNTSVPNN---PMCSMTQGIQ----FIEKTCPGATSRFTTNFLILYSFIPTLV 636

  Fly   867 VL 868
            :|
  Rat   637 IL 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31121NP_733058.1 P-loop_NTPase 319..518 CDD:304359 55/209 (26%)
cbiO 319..491 CDD:130234 48/182 (26%)
ABC2_membrane 621..809 CDD:279410 40/213 (19%)
Abcg5NP_446206.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 1/1 (100%)
ABCG_White 50..276 CDD:213201 56/229 (24%)
3a01204 61..646 CDD:273361 137/619 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.