DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycB3 and CLB1

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_011622.1 Gene:CLB1 / 853002 SGDID:S000003340 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:548 Identity:136/548 - (24%)
Similarity:234/548 - (42%) Gaps:132/548 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VENMQT---RAKRKADHSP--IKNDKIKRSALGNLTNNVKIMTLHPAQDEEQSGVGKKPTAQQLQ 111
            |||.:|   ..::..:.|.  ::...:.|:.|||:|||..|:                       
Yeast     7 VENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANIL----------------------- 48

  Fly   112 ALMDAKKQENLSVNVFGASKMTTRASSKVEDSVENCHKVLDKLEEALARPKPRPKAVPAAKKTVL 176
                    :.:|:|    .|:..:..||:.:        ...|::.::|......:...:::.|.
Yeast    49 --------QEISMN----RKIGMKNFSKLNN--------FFPLKDDVSRADDFTSSFNDSRQGVK 93

  Fly   177 GEVQLPAMPNPMQIPVLLPPTHNLAAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRL 241
            .||    :.|...||           ....:.:..::.|||     ||.:.::  ...||:.:..
Yeast    94 QEV----LNNKENIP-----------EYGYSEQEKQQCSND-----DSFHTNS--TALSCNRLIY 136

  Fly   242 SGNFEAARRR--SAKLQQKTEQQPQPLLLTLPE------------TAPSQVVPIPPVPEEVE--D 290
            |.|...:.:.  ..|:.::..::.:| :.||.|            |...:|:      ||.|  |
Yeast   137 SENKSISTQMEWQKKIMREDSKKKRP-ISTLVEQDDQKKFKLHELTTEEEVL------EEYEWDD 194

  Fly   291 FDRKNWDDPFQVSHYAMDIFNYLKVREAEFPIADYMPRQIHL-----TTWMRTLLVDWMVEVQET 350
            .|.::.|||..||....|||:||...|     ...:|.:.:|     ....|.:||:|::::...
Yeast   195 LDEEDCDDPLMVSEEVNDIFDYLHHLE-----IITLPNKANLYKHKNIKQNRDILVNWIIKIHNK 254

  Fly   351 FELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHD 415
            |.|..||||||:.|:|.:||.||:...:|||:|.:..|||.||:|...|.|:.|.|..|||.:.:
Yeast   255 FGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVE 319

  Fly   416 ELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMPTLTLARYILELSLMDYANISFSDSQMA 480
            ::...||..|..:.:.:.......||||.::.....:.:.|||::::|:|::|:..|....|..|
Yeast   320 DIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCA 384

  Fly   481 SAALFMALRMHGGPGQLDKQTWTSTLIYYT-GYQLADFAEIVTAL-----NAGLH---------- 529
            |||:|::.:|      |.|.||...||:|: ||..|....:...|     .:.:|          
Yeast   385 SAAMFLSRKM------LGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSR 443

  Fly   530 RKPRATI-------KTIRNKYSHKIFHE 550
            |..:|:|       |..:|.|.....||
Yeast   444 RFLKASIISIEWALKVRKNGYDIMTLHE 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 46/129 (36%)
Cyclin_C 435..555 CDD:281044 38/139 (27%)
CLB1NP_011622.1 COG5024 1..467 CDD:227357 134/542 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343517
Domainoid 1 1.000 50 1.000 Domainoid score I2893
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9224
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
TreeFam 1 0.960 - -
87.800

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