DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycB3 and CLB4

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_013311.1 Gene:CLB4 / 850907 SGDID:S000004200 Length:460 Species:Saccharomyces cerevisiae


Alignment Length:454 Identity:101/454 - (22%)
Similarity:204/454 - (44%) Gaps:101/454 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 QSGVGKKPTAQQLQALMDAKKQENLSVNVFGASKMTTRASSKVEDSVEN-CHKVLDKLEEALARP 161
            |.|:.:....|:..||.|                :|::.::|:.:::.| .|:..:..|      
Yeast    39 QKGIKRLEKRQRRVALGD----------------VTSQKANKIHNAIHNKFHQTKNNFE------ 81

  Fly   162 KPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPPTHNLAAPQVAAVKPVRRISNDF-------- 218
                          :..::..|:....|                   :.||...:|:        
Yeast    82 --------------IENIRSSALVKEQQ-------------------RDVRHEDSDYFLIDSSEG 113

  Fly   219 NKTED-SLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQQPQPLLLTLPETAPSQVVPIP 282
            :.|:| .:...|::|:       ||......:.::.::.:..:.:.|.:   :.|...||:.|:.
Yeast   114 SSTDDEQVNEDAIDDL-------LSRRVNDQQIQADEVYEDFDGEMQDV---IEEDVDSQIEPLS 168

  Fly   283 PV-PEEVE-DFDR--------------KNWDDPFQVSHYAMDIFNYLKVREAEF-PIADYMPRQI 330
            |: .:|:: :.||              .:..|...|..||.|||.||:..|.:: |...||..|:
Yeast   169 PINNDEIQTELDRAFEKYFRSVPNPLDDDTHDVVMVVEYASDIFYYLRELEVKYRPNPYYMQNQV 233

  Fly   331 HLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDE 395
            .||...|..::||:|::...|:|..|||||.:.|||.:|.::.:...:.||:|.:|.|||.|::|
Yeast   234 ELTWPFRRTMIDWLVQLHFRFQLLPETLYLTINIVDRFLSKKTVTLNRFQLVGVSALFIAAKFEE 298

  Fly   396 RQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMPTLTLARY 460
            ...|.::|.:|:.:..|..|:::|.|:..:..:::::|.|....||||.::.........|||:|
Yeast   299 INCPTLDDLVYMLENTYTRDDIIRAEQYMIDTLEFEIGWPGPMPFLRRISKADDYDFEPRTLAKY 363

  Fly   461 ILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGY---QLADFAEIV 521
            :||.::::...::.:.|.:|:.|.|::..:      |....|:...::|:||   |:...|.::
Yeast   364 LLETTIVEPKLVAAAPSWLAAGAYFLSRTI------LGSNDWSLKHVFYSGYTSSQIIPLASLI 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 43/125 (34%)
Cyclin_C 435..555 CDD:281044 22/90 (24%)
CLB4NP_013311.1 COG5024 10..459 CDD:227357 101/454 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9224
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
TreeFam 1 0.960 - -
65.800

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