DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and CYCD1;1

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_177178.1 Gene:CYCD1;1 / 843357 AraportID:AT1G70210 Length:339 Species:Arabidopsis thaliana


Alignment Length:213 Identity:53/213 - (24%)
Similarity:85/213 - (39%) Gaps:39/213 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 PIADYMPR--QIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEK---LQ 380
            |..||:.|  ...|....|...|.|:::||..:.....|.||||..:|.:|....:.:..   :|
plant    64 PGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQ 128

  Fly   381 LLGAAAFFIACKYDERQPPLIEDF-----LYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRF 440
            ||..|...:|.|.:|...|.:.||     .|:    :....:.|||...|.|:.:.|.....:.|
plant   129 LLAVACLSLAAKMEEILVPSLFDFQVAGVKYL----FEAKTIKRMELLVLSVLDWRLRSVTPFDF 189

  Fly   441 LRRYARCAKVPMPTLTLARYIL----ELSLMDYANISFSD---SQMASAA----------LFMAL 488
            :..:|  .|:. |:.|...:.:    |:.|.:....||.:   |.:|:||          |...:
plant   190 ISFFA--YKID-PSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVV 251

  Fly   489 RMHGGPGQLDKQTWTSTL 506
            ..|..|     :||...|
plant   252 NPHESP-----ETWCDGL 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 33/119 (28%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 19/89 (21%)
CYCD1;1NP_177178.1 CYCLIN_AtCycD-like_rpt1 81..179 CDD:410246 28/101 (28%)
CYCLIN_AtCycD-like_rpt2 184..276 CDD:410247 19/89 (21%)

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