DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and CYCA3;4

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_973983.1 Gene:CYCA3;4 / 841126 AraportID:AT1G47230 Length:370 Species:Arabidopsis thaliana


Alignment Length:427 Identity:126/427 - (29%)
Similarity:194/427 - (45%) Gaps:94/427 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 ENCHKVLDKLEEALARPKPRPKAV---PAAKK-TVLGEVQLPAMPNPMQIPVLLPPTHNLAAPQV 205
            :||    .::..|.|:.|....|:   |.:|| .||||  ||.|.|.:.:|              
plant     5 QNC----ARMTRAAAKRKASSMALDENPVSKKRVVLGE--LPNMSNVVAVP-------------- 49

  Fly   206 AAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQQPQPLLLTL 270
                         |:..::|                          .||....|.::.....|.:
plant    50 -------------NQERETL--------------------------KAKTSVNTSKRQMKKALMI 75

  Fly   271 PETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLKVREAE---FPIADYMPR-QIH 331
            ||.  |.::....|             ||.....:|.||..||:..|.:   .|:.||:.: |..
plant    76 PEA--SVLIESRSV-------------DPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSD 125

  Fly   332 LTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIAC-KYDE 395
            ||..||.:||||:|||.|.::|..:||||.:..||.:|..:.||::||||:|.:|..||. ||:|
plant   126 LTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYEE 190

  Fly   396 RQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAK-----VPMPTL 455
            ..||.:|||.||.|..:...|:|.||.:.|..::::||.|....||||:.|.|:     ..:...
plant   191 IGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIE 255

  Fly   456 TLARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGYQLADFAEI 520
            .|..|:.|||::||..:.:..|.::::|:|:| |....|.|   ..|...|..||.|:.||. ::
plant   256 FLCCYLSELSMLDYTCVKYLPSLLSASAVFLA-RFIIRPKQ---HPWNQMLEEYTKYKAADL-QV 315

  Fly   521 VTALNAGLHRKPRA-TIKTIRNKYSHKIFHEVAKVPL 556
            ...:...|:...|. |::.:||||....:..||.:|:
plant   316 CVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPV 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 55/129 (43%)
Cyclin_C 435..555 CDD:281044 37/125 (30%)
CYCA3;4NP_973983.1 Cyclin_N 98..228 CDD:278560 55/129 (43%)
Cyclin_C 230..353 CDD:281044 38/128 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2906
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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