DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and CYCB3;1

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_173083.3 Gene:CYCB3;1 / 838202 AraportID:AT1G16330 Length:648 Species:Arabidopsis thaliana


Alignment Length:660 Identity:156/660 - (23%)
Similarity:262/660 - (39%) Gaps:166/660 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QAVNP--ILGALGAATRKGLTRRAAATGN---IDPNVENMQTRAKR--KADHSPIKN----DKIK 74
            |..:|  .:|.....||..|.|::....|   ...|..||:....|  ....|.|:|    .|:.
plant    31 QKTDPASTIGTSQKKTRIPLRRKSVTISNGLGATSNTNNMKKENSRITGKGKSSIENWEEYTKVT 95

  Fly    75 RSALGNLT----NNVKIMTLHPAQDEEQSGVGKKPTAQQLQALMDAKKQENLSV------NVFGA 129
            |.||.:|:    |.::|.||..:...:..||   ..|...:..:...:..|:||      ||   
plant    96 RKALADLSNLGGNTLRIPTLCGSSTMKWKGV---KMANPKRVSVGPTRANNISVKKSTKENV--- 154

  Fly   130 SKMTTRASSKVEDSVENCHK-----VLDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMP---- 185
            ||.||...:      .|.:|     :.:|.....:......|::|..|:|.|.:..|....    
plant   155 SKRTTELGN------NNLYKTGQKFIKNKTLSLGSTAGGTRKSLPTLKRTSLTDKSLKKFNVSGL 213

  Fly   186 NPMQI-PVLLPPTHNLAAPQVAAV--------KPVRRISNDFNKTEDSLYMSALEDVSSCDSMRL 241
            |..|: ..|.....|.|.||:::.        ..|..|.:|.||             .|.:::|.
plant   214 NSKQLGQGLASKASNQAVPQLSSAGTYTWKTRTSVGSIQSDGNK-------------QSKNNVRF 265

  Fly   242 SGNFEAARRRSAKLQQ--KTEQQPQPLLLTLP---------ETAPSQVVPIP-PVPEEVE----- 289
            .       |:|.|:|.  ||..|.:..|...|         .:.||..|... .:||:||     
plant   266 V-------RKSIKIQTTVKTSLQNRSSLKKPPVGRSKSRSISSIPSSAVASTLSLPEKVETKCLE 323

  Fly   290 ------------------------------------------DFDRKNWD--------------D 298
                                                      .||.||.:              :
plant   324 EDTQGESSSSGNKDPTTKVLDVTAKPKSKRRKSFTSLLVNGSKFDEKNGETTEPEKLPSIDDESN 388

  Fly   299 PFQVSHYAMDIFNYLKVREAEFP-IADYMPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAV 362
            ..:|:.|..||:.:....||..| :..|:.....::...|.:|::|::||...|:|.||||||.:
plant   389 QLEVAEYVDDIYQFYWTAEALNPALGHYLSAHAEVSPVTRGILINWLIEVHFKFDLMHETLYLTM 453

  Fly   363 KIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRV 427
            .::|.||.:..|:|.::||:|..|..:|.||::...|.|:|.:.|...:|..::::.|||..|:.
plant   454 DLLDRYLSQVPIHKNEMQLIGLTALLLASKYEDYWHPRIKDLISISAESYTREQILGMERSMLKQ 518

  Fly   428 IKYDLGIPLSYRFLRRYARCAKVPMPTLTLARYILELSLMDYANISFSDSQMASAALFMA-LRMH 491
            :|:.|..|..|.|:.|:.:.|:.......||.|::||.|::|..:.:..|.:.::|:::| ..:|
plant   519 LKFRLNAPTPYVFMLRFLKAAQSNKKLEQLAFYLIELCLVEYEALKYKPSLLCASAIYVARCTLH 583

  Fly   492 GGPGQLDKQTWTSTLIYYTGY---QLADFAEIVTALNAGLHRKPR-ATIKTIRNKYSHKIFHEVA 552
            ..|      .|||.|..:|.|   |:.|.::::..    .|:..: ..::....||.:.....||
plant   584 MTP------VWTSLLNNHTHYNVSQMKDCSDMILR----FHKAAKTGNLRVTYEKYINPDRSNVA 638

  Fly   553 ------KVPL 556
                  |:||
plant   639 VLKPLDKLPL 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 41/125 (33%)
Cyclin_C 435..555 CDD:281044 31/130 (24%)
CYCB3;1NP_173083.3 CYCLIN_CCNB1-like_rpt1 392..521 CDD:410211 42/128 (33%)
CYCLIN_AtCycB-like_rpt2 526..642 CDD:410215 30/125 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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