DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and CYCA2;1

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001332473.1 Gene:CYCA2;1 / 832610 AraportID:AT5G25380 Length:443 Species:Arabidopsis thaliana


Alignment Length:518 Identity:140/518 - (27%)
Similarity:223/518 - (43%) Gaps:99/518 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RAKRKADHSPIKNDKIKRSALGNLTNNVKIMTLHPAQDEEQSGVGKKPTAQQLQALMDAKKQENL 122
            ||..|  |:..|.:.|..|.:.:  |||::    .....:..||...|:       ..|.|.|  
plant     3 RASSK--HTNAKKEAISTSKIRD--NNVRV----TRSRAKALGVSNSPS-------KPAFKHE-- 50

  Fly   123 SVNVFGASKMTTRASSK--VEDSVENCHKVLDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMP 185
                   :|...|.|:|  ..|::..|::                     .::.||.:|      
plant    51 -------TKRVARPSNKRMASDNITVCNQ---------------------KRRAVLKDV------ 81

  Fly   186 NPMQIPVLLPPTHNLAAPQVAA---VKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEA 247
                       |:.||...::.   ||..:|...:..:.|:    ..|.||.. :..:|:.:...
plant    82 -----------TNTLAESIISTEGNVKACKRGGKETKQIEE----DGLVDVDG-EKSKLAEDLSK 130

  Fly   248 ARRRSAKLQQKTEQQPQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNY 312
            .|...:.....::|:    |:...|...|.|...    .::.|.| ....||...|.||..|::.
plant   131 IRMVESLDASASKQK----LVDCAEEDRSDVTDC----VQIVDID-SGVQDPQFCSLYAASIYDS 186

  Fly   313 LKVREAE-FPIADYMPR-QIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVIN 375
            :.|.|.| .|...||.: |..:...||.:|:||:|||.|.::|..:||||.|.::|.::....|.
plant   187 INVAELEQRPSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIE 251

  Fly   376 KEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRF 440
            |:||||||.....||.||:|...|.:|:|.:|.|..|...|::.||.:.|..:.:.|.:|.:..|
plant   252 KQKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTF 316

  Fly   441 LRRYARCA----KVPMPTLT-LARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQ 500
            |||:.|.|    |||:..:. ||.|..||:|.:|..:.|..|.:|::|:|:|      ...||:.
plant   317 LRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLA------RWTLDQS 375

  Fly   501 T--WTSTLIYYTGYQLADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEVAKVPLLTNQE 561
            .  |..||.:||.|:.:.....|.|:.........:|:..|..||:.:.|..||   .||:.|
plant   376 NHPWNQTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRVA---TLTSPE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 54/142 (38%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 40/126 (32%)
CYCA2;1NP_001332473.1 CYCLIN_AtCycA_like_rpt1 172..307 CDD:410265 52/134 (39%)
CYCLIN_AtCycA-like_rpt2 311..425 CDD:410210 37/119 (31%)

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