DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and CYCA2;1

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001332473.1 Gene:CYCA2;1 / 832610 AraportID:AT5G25380 Length:443 Species:Arabidopsis thaliana


Alignment Length:518 Identity:140/518 - (27%)
Similarity:223/518 - (43%) Gaps:99/518 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RAKRKADHSPIKNDKIKRSALGNLTNNVKIMTLHPAQDEEQSGVGKKPTAQQLQALMDAKKQENL 122
            ||..|  |:..|.:.|..|.:.:  |||::    .....:..||...|:       ..|.|.|  
plant     3 RASSK--HTNAKKEAISTSKIRD--NNVRV----TRSRAKALGVSNSPS-------KPAFKHE-- 50

  Fly   123 SVNVFGASKMTTRASSK--VEDSVENCHKVLDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMP 185
                   :|...|.|:|  ..|::..|::                     .::.||.:|      
plant    51 -------TKRVARPSNKRMASDNITVCNQ---------------------KRRAVLKDV------ 81

  Fly   186 NPMQIPVLLPPTHNLAAPQVAA---VKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEA 247
                       |:.||...::.   ||..:|...:..:.|:    ..|.||.. :..:|:.:...
plant    82 -----------TNTLAESIISTEGNVKACKRGGKETKQIEE----DGLVDVDG-EKSKLAEDLSK 130

  Fly   248 ARRRSAKLQQKTEQQPQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNY 312
            .|...:.....::|:    |:...|...|.|...    .::.|.| ....||...|.||..|::.
plant   131 IRMVESLDASASKQK----LVDCAEEDRSDVTDC----VQIVDID-SGVQDPQFCSLYAASIYDS 186

  Fly   313 LKVREAE-FPIADYMPR-QIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVIN 375
            :.|.|.| .|...||.: |..:...||.:|:||:|||.|.::|..:||||.|.::|.::....|.
plant   187 INVAELEQRPSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIE 251

  Fly   376 KEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRF 440
            |:||||||.....||.||:|...|.:|:|.:|.|..|...|::.||.:.|..:.:.|.:|.:..|
plant   252 KQKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTF 316

  Fly   441 LRRYARCA----KVPMPTLT-LARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQ 500
            |||:.|.|    |||:..:. ||.|..||:|.:|..:.|..|.:|::|:|:|      ...||:.
plant   317 LRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLA------RWTLDQS 375

  Fly   501 T--WTSTLIYYTGYQLADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEVAKVPLLTNQE 561
            .  |..||.:||.|:.:.....|.|:.........:|:..|..||:.:.|..||   .||:.|
plant   376 NHPWNQTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRVA---TLTSPE 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 47/126 (37%)
Cyclin_C 435..555 CDD:281044 40/126 (32%)
CYCA2;1NP_001332473.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2906
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.880

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