DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and CYCD5;1

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_195478.2 Gene:CYCD5;1 / 829917 AraportID:AT4G37630 Length:323 Species:Arabidopsis thaliana


Alignment Length:247 Identity:50/247 - (20%)
Similarity:97/247 - (39%) Gaps:52/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 RTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEK-----LQLLGAAAFFIACKYDER 396
            |.:.:||::..:..|...|:|.|:|:...||:|.:..|..:|     ::||..|...:|.|.:||
plant    72 RLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEER 136

  Fly   397 QPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMPTLTLARYI 461
            ..|.:..:....|..:..|.:.:.|...|..:.:.:.:...:.:...:  .||:.....::::  
plant   137 IVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDW
KMNLITPFHYFNYF--LAKISQDNHSVSK-- 197

  Fly   462 LELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGYQLADFAEIVTAL-N 525
                  |...:..|||.:|                |.|:      |.:|.|:....|.:.|.| :
plant   198 ------DLVLLRSSDSLLA----------------LTKE------ISFTEYRQFVVAAVTTLLAS 234

  Fly   526 AGLHRKPRATIKTIRNKYSHKIFHEVAKVPLLTNQE------LFQGNLDLNE 571
            :......|.|.:.|.||:        ..:...|:.|      .:|..|::.|
plant   235 SSTSSDIRLTREEIANKF--------GSISWWTSNENENVYLCYQRTLEIEE 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 25/98 (26%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 20/120 (17%)
CYCD5;1NP_195478.2 CYCLIN_AtCycD-like_rpt1 71..170 CDD:410246 25/97 (26%)
CYCLIN_AtCycD-like_rpt2 175..272 CDD:410247 22/136 (16%)

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