DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and CYCB2;1

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_179353.1 Gene:CYCB2;1 / 816269 AraportID:AT2G17620 Length:429 Species:Arabidopsis thaliana


Alignment Length:479 Identity:119/479 - (24%)
Similarity:216/479 - (45%) Gaps:102/479 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 QDEEQSGVGKKPTAQQLQALMDAKKQENLSV---NVFGA-------SKMTTRASSKVEDSVENCH 148
            |||.:|    :...|:    |..:|:..|.|   |:.||       :|..:..|:|.|:. |.|.
plant    20 QDETRS----RKFGQE----MKREKRRVLRVINQNLAGARVYPCVVNKRGSLLSNKQEEE-EGCQ 75

  Fly   149 KVLDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPPTHNLAAPQVAAVKPVRR 213
            |   |..::|     ||....:..:....:...|::|:                           
plant    76 K---KKFDSL-----RPSVTRSGVEEETNKKLKPSVPS--------------------------- 105

  Fly   214 ISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQQPQPLLLTLP--ETAPS 276
             :|||.   |.:::..                          ::.|...|.|:.|..|  |..|.
plant   106 -ANDFG---DCIFIDE--------------------------EEATLDLPMPMSLEKPYIEADPM 140

  Fly   277 QVVPIP--PVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLKVRE--AEFPIADYMPRQIHLTTWMR 337
            :.|.:.  .|.|.:.|.|..:..:......|..|::.:.:..|  :..|: |||.:||.|...||
plant   141 EEVEMEDVTVEEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPV-DYMMQQIDLNEKMR 204

  Fly   338 TLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQPPLIE 402
            .:|:||::||.:.|:|.:|||:|.|.::|.:|.::.:.::||||:|..|..:||||:|...|::|
plant   205 AILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEVSVPVVE 269

  Fly   403 DFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMPTLTLARYILELSLM 467
            |.:.|.|.||..::::.||:..|..:::::.:|..|.||:|:.:.|:.......||.:::||:|:
plant   270 DLVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRFLKAAQADKKCEVLASFLIELALV 334

  Fly   468 DYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGY---QLADFAEIVTALNAGLH 529
            :|..:.|..|.:|:.:::.|.....|     .:.|.||..::..|   ||.:.:..:.:|:   .
plant   335 EYEMLRFPPSLLAATSVYTAQCTLDG-----SRKWNSTCEFHCHYSEDQLMECSRKLVSLH---Q 391

  Fly   530 RKPRATIKTIRNKYSHKIFHEVAK 553
            |.....:..:..|||...|..:||
plant   392 RAATGNLTGVYRKYSTSKFGYIAK 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 49/142 (35%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 31/122 (25%)
CYCB2;1NP_179353.1 CYCLIN_AtCycB-like_rpt1 151..297 CDD:410270 50/146 (34%)
CYCLIN_AtCycB-like_rpt2 302..417 CDD:410215 31/122 (25%)

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