DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and ccnb1

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_571588.1 Gene:ccnb1 / 58025 ZFINID:ZDB-GENE-000406-10 Length:398 Species:Danio rerio


Alignment Length:375 Identity:116/375 - (30%)
Similarity:183/375 - (48%) Gaps:71/375 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 SALEDVSSCDSMRLSGNFEAARRRSAKLQQKTE---------QQPQPLLLTLPETAPS-----QV 278
            :||.::.:....|     :|.:::..|:....|         |||:       :.:|.     :|
Zfish    37 AALGEIGNNPQTR-----QALKKKEVKVAPAAEVVVEKAPVVQQPK-------KDSPKVQHGVKV 89

  Fly   279 V--PIPPVPEE-------------------VEDFDRKNWDDPFQVSHYAMDIFNYLKVREAEFPI 322
            |  |..|||.|                   ::|.|..::|:|...|.|..||:.||:..|.|..:
Zfish    90 VSEPSSPVPMETSGCASDDLCQAFSDVLLNIKDVDADDYDNPMLCSEYVKDIYLYLRQLETEQAV 154

  Fly   323 ADYMPRQI---HLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGA 384
               .|:.:   .:|..||.:|:||:|:||..|.|..||:|:.|.|:|.:|....:.|::|||:|.
Zfish   155 ---RPKYLAGKEVTGNMRAILIDWLVQVQIKFRLLQETMYMTVAIIDRFLQDHPVPKKQLQLVGV 216

  Fly   385 AAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAK 449
            .|.|||.||:|..||.|.||.::.|.||...::..||.:.|||:.:..|.||..:||||.::...
Zfish   217 TAMFIASKYEEMYPPEIADFAFVTDRAYTTSQIREMEMKVLRVLNFGFGRPLPLQFLRRASKIGD 281

  Fly   450 VPMPTLTLARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGYQ- 513
            |.....|||:|.|||:::||..:.:..|||||||..:.|::      .:...||.||.:|.||. 
Zfish   282 VTAEHHTLAKYFLELTMVDYDMVHYPPSQMASAAYALTLKV------FNCGDWTPTLQHYMGYTE 340

  Fly   514 ------LADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEVAKVPLL 557
                  :...|:.|..:|.||.:.     ..::||||.:....:|.:..|
Zfish   341 DELVPVMQHIAKNVVRVNEGLSKH-----LAVKNKYSSQKQMRIATISQL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 50/127 (39%)
Cyclin_C 435..555 CDD:281044 41/126 (33%)
ccnb1NP_571588.1 Cyclin_N 140..262 CDD:278560 50/124 (40%)
Cyclin_C 267..385 CDD:281044 41/128 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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