DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and ccna1

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001016239.1 Gene:ccna1 / 548993 XenbaseID:XB-GENE-922387 Length:426 Species:Xenopus tropicalis


Alignment Length:435 Identity:135/435 - (31%)
Similarity:207/435 - (47%) Gaps:70/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 EALARPKPRPKAVP--AAKKTVLGEVQ------------------LPAMPNPMQIPVLLPPTHNL 200
            :.||:.:.:...:|  .:::||||.:.                  ||.:.|.:.....:.||:  
 Frog    27 QCLAKVEVQSNLLPPRVSQRTVLGVISDNDQQKRSVGQGGAPAKCLPGIENVLPFAGKILPTN-- 89

  Fly   201 AAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQQPQP 265
              |.:.|.||:..:..|..:.....| |..||..:.|                ::.....:|...
 Frog    90 --PALVAPKPIFTVYVDEPEEPTETY-SIEEDCPTLD----------------EVDSNIVKQNIH 135

  Fly   266 LLLTLPETAPSQV---VPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLKVREAEF---PIAD 324
            |||.|...:|..|   :...|..:.:.|      .|...||.|..:|..||  ||||.   |.|.
 Frog   136 LLLDLSAASPMVVDTSLQASPEDDSITD------PDAVAVSEYIDEIHQYL--REAELKHRPKAY 192

  Fly   325 YMPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYL-CREVINKEKLQLLGAAAFF 388
            ||.:|..:|:.|||:||||:.||.|.::|..|||||||..:|.:| |..|: :.||||:|.||..
 Frog   193 YMRKQPDITSAMRTILVDWLTEVGEEYKLRTETLYLAVNYLDRFLSCMSVL-RGKLQLVGTAAIL 256

  Fly   389 IACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMP 453
            :|.||:|..||.:::|:||.|..|:..:|:|||...|:|:.:||.:|...:||.:|.:...|.:.
 Frog   257 LASKYEEIYPPDVDEFVYITDDTYSKKQLLRMEHLLLKVLAFDLTVPTISQFLLQYLQRRAVSVK 321

  Fly   454 TLTLARYILELSLMDYAN-ISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGYQLADF 517
            |..||.|:.||||:|... :.:..|..|:||..:|      ...|:|..|..||..:|||.|::.
 Frog   322 TEHLAMYLAELSLLDVEPFLKYVPSITAAAAYCLA------NYALNKVFWPETLETFTGYTLSEI 380

  Fly   518 AEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEV------AKVPL 556
            ...::.|:....|.|....:.||.||....:.:|      |.:||
 Frog   381 TPCLSDLHQASLRAPFQAQQAIREKYKTPKYMQVSLLEMPAVLPL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 60/128 (47%)
Cyclin_C 435..555 CDD:281044 37/126 (29%)
ccna1NP_001016239.1 COG5024 83..415 CDD:227357 121/367 (33%)
Cyclin_N 175..301 CDD:365896 60/128 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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