DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and ccndx

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001016108.1 Gene:ccndx / 548862 XenbaseID:XB-GENE-483042 Length:290 Species:Xenopus tropicalis


Alignment Length:187 Identity:54/187 - (28%)
Similarity:80/187 - (42%) Gaps:9/187 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 IFNYLKVREAEFPIADY---MPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLC 370
            :...|.:.|...|.|.|   :.|.|.  .:||.:|..||:||.|..:...|...|||..:|.||.
 Frog    28 LMKLLALEERYIPSASYFRCVQRDIQ--PYMRHMLTCWMLEVCEDQKCGEEVFPLAVNCLDRYLS 90

  Fly   371 REVINKEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIP 435
            ...:.|..||||||...|:|.|..|.:|...|......|..:...||:.||...|..:|:||.:.
 Frog    91 LVPVEKRHLQLLGATCLFLASKLRESKPMTAESLCMYSDHCFTDKELLAMELLVLNKLKWD
LEVV 155

  Fly   436 LSYRFLRRYARCAKVPMPTLTLAR----YILELSLMDYANISFSDSQMASAALFMAL 488
            ....:|..:.....:|.......|    ..:.|...|...|:...|.:|:|::..|:
 Frog   156 TPREYLPHFLELLNIPAEKRPQVRKHSETFIALCTTDCTFIALPPSMVAAASVAAAV 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 42/124 (34%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 10/58 (17%)
ccndxNP_001016108.1 CYCLIN_CCND_rpt1 5..151 CDD:410219 42/124 (34%)
CYCLIN_SF 156..265 CDD:477360 10/57 (18%)

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