DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and ccnb1.2

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_989121.1 Gene:ccnb1.2 / 394726 XenbaseID:XB-GENE-5736422 Length:397 Species:Xenopus tropicalis


Alignment Length:499 Identity:132/499 - (26%)
Similarity:215/499 - (43%) Gaps:131/499 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KIKRSALGNLTNNVKIMTLHPAQDEEQSG---VGKKPTAQQLQALMDAKKQENLSVNVFGASKMT 133
            :|.|:.:.|..||||...         :|   |..||..:...||.|...:..|.|    .:|..
 Frog     4 RITRNMMANAENNVKTTV---------AGKRVVATKPVLRPRTALGDIGNKAELKV----PAKKE 55

  Fly   134 TRASSKVEDSVENCHKVLD--KLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPP 196
            .:.:.|....|:...|||:  |:.|....|||             .:|: |:.|:||:....|| 
 Frog    56 LKPAVKAIKKVKPVDKVLEPLKVREENVCPKP-------------AQVE-PSSPSPMETSGCLP- 105

  Fly   197 THNLAAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQ 261
                                      |.| ..|..||                            
 Frog   106 --------------------------DEL-CQAFSDV---------------------------- 115

  Fly   262 QPQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLK-VREAEFPIADY 325
                 |:                  :|:|.|..:..:|...|.|..||:.||: :..|:....:|
 Frog   116 -----LI------------------QVKDVDADDDGNPMLCSEYVKDIYCYLRSLENAQAVRQNY 157

  Fly   326 MPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIA 390
            :..| .:|..||.:|:||:|:||..|.|..||:::.|.|:|.:|....:.|.:|||:|..|.|:|
 Frog   158 LHGQ-EVTGNMRAILIDWLVQVQMKFRLLQETMFMTVGIIDRFLQDHPVPKNQLQLVGVTAMFLA 221

  Fly   391 CKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMPTL 455
            .||:|..||.|.||.::.|..|...::..||.:.|||:|:.:|.||...||||.::..:|.....
 Frog   222 AKYEEMYPPEIGDFTFVTDHTYTKAQIRDMEMKVLRVLKFAIGRPLPLHFLRRASKIGEVTAEQH 286

  Fly   456 TLARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGY-------Q 513
            :||:|::||.::||..:.:|.||:|:||..::|::      |:...||.|:.:|..|       .
 Frog   287 SLAKYLMELVMVDYDMVHYSPSQIAAAASCLSLKI------LNTGEWTPTMHHYMAYFEDDLVPV 345

  Fly   514 LADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEVAKVPLL 557
            :...|:.:..:|.||.:.     .|::|||:.....:::.:|.|
 Frog   346 MQHMAKNIIKVNKGLTKH-----LTVKNKYASSKQMKISMIPQL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 48/125 (38%)
Cyclin_C 435..555 CDD:281044 35/126 (28%)
ccnb1.2NP_989121.1 COG5024 <120..381 CDD:227357 89/272 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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