DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycB3 and ccnd1

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_571100.1 Gene:ccnd1 / 30222 ZFINID:ZDB-GENE-980526-176 Length:291 Species:Danio rerio


Alignment Length:204 Identity:58/204 - (28%)
Similarity:87/204 - (42%) Gaps:12/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 LKVREAEFPIADYMP-RQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINK 376
            ||..|...|..:|.. .|..:...||.::..||:||.|..:...|...||:..:|.:|..|...|
Zfish    32 LKAEENYLPSPNYFKCVQKEIVPKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVEPTKK 96

  Fly   377 EKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFL 441
            .:||||||...|:|.|..|..|...|......|.:....||::||...|..:|:||.....:.|:
Zfish    97 TRLQLLGATCMFLASKMKETVPLTAEKLCIYTDNSVRPGELLQMELLALNKLKWD
LASVTPHDFI 161

  Fly   442 RRYARCAKVPMPTLTL------ARYILELSLMDYANISFSDSQMAS---AALFMALRMHGGPGQL 497
            ..:  .||:|:...:.      |:..:.|...|...|:...|.:|:   ||....|.:......|
Zfish   162 EHF--LAKLPIHQSSKQILRKHAQTFVALCATDVNFIASPPSMIAAGSVAAAVQGLYLKSTDSCL 224

  Fly   498 DKQTWTSTL 506
            ..|..|:.|
Zfish   225 SSQNLTNFL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 39/118 (33%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 17/81 (21%)
ccnd1NP_571100.1 CYCLIN_CCND1_rpt1 3..151 CDD:410276 39/118 (33%)
CYCLIN_CCND1_rpt2 156..265 CDD:410279 17/80 (21%)

Return to query results.
Submit another query.