DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and cig2

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_593889.1 Gene:cig2 / 2543481 PomBaseID:SPAPB2B4.03 Length:411 Species:Schizosaccharomyces pombe


Alignment Length:422 Identity:119/422 - (28%)
Similarity:184/422 - (43%) Gaps:54/422 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 MTTRASSKVEDSVENCHKVLDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPP 196
            |...:.||...|..|.|...|  |..|...:...|.....|.:...|:.||..       .:|..
pombe     1 MALYSISKPVGSKINKHSYQD--ENTLVGKQALSKGTEKTKLSTNFEINLPRR-------TVLSD 56

  Fly   197 THNLAAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTE- 260
            ..|:.... |..|..::....|                  |...||.|.||.:...:|..:|.: 
pombe    57 VSNVGKNN-ADEKDTKKAKRSF------------------DESNLSTNEEADKPVESKFVKKLKV 102

  Fly   261 --QQPQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLKVREAE-FPI 322
              :...|.:.||.:             :.|.:.|.....:|.....||.:||.|::..:.: .|.
pombe   103 YSKNADPSVETLQK-------------DRVSNVDDHLSSNPLMAEEYAPEIFEYIRKLDLKCLPN 154

  Fly   323 ADYMPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAF 387
            ..||.:|..||..||.:|.:|:||:...|.|..|||||||.|:|.:|.|...:..|.||.|..|.
pombe   155 PKYMDQQKELTWKMREILNEWLVEIHSNFCLMPETLYLAVNIIDRFLSRRSCSLSKFQLTGITAL 219

  Fly   388 FIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPM 452
            .||.||:|...|.|::|:|:.|||:..:::...||..|.|:.:||..|....|||:.::......
pombe   220 LIASKYEEVMCPSIQNFVYMTDGAFTVEDVCVAERYMLNVLNFDLSYPSPLNFLRKISQAEGYDA 284

  Fly   453 PTLTLARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYT-GYQLAD 516
            .|.||.:|:.|:.|.|:..:.:..|::|:||::::.|:      |.:..||..|:..: ||:..:
pombe   285 QTRTLGKYLTEIYLFDHDLLRYPMSKIAAAAMYLSRRL------LRRGPWTPKLVESSGGYEEHE 343

  Fly   517 FAEIVTALNAGLHRKPRATIKTIRNKYSHKIF 548
            ..||...: ...|.|| ...|....|||.|.|
pombe   344 LKEIAYIM-LHYHNKP-LEHKAFFQKYSSKRF 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 53/141 (38%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 33/115 (29%)
cig2NP_593889.1 COG5024 1..399 CDD:227357 119/422 (28%)

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