DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and Ccng1

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_037055.1 Gene:Ccng1 / 25405 RGDID:2295 Length:294 Species:Rattus norvegicus


Alignment Length:250 Identity:55/250 - (22%)
Similarity:107/250 - (42%) Gaps:38/250 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 IHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACK-- 392
            :.:|..:|...|..::.:.:.|..:.||..|||.::|.:|.:..:..:.|..:|.:.|::|.|  
  Rat    44 LRMTARLRDFEVKDLLSLTQFFGFDTETFSLAVNLLDRFLSKMKVQAKHLGCVGLSCFYLAVKSI 108

  Fly   393 YDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMP---- 453
            .:||..||..|.:.|....:...:|:|||:..|..:.:.:....:::||:.|....:..:|    
  Rat   109 EEERNVPLATDLIRISQYRFTVSDLMRMEKIVLEKVCWKVKATTAFQFLQLYYSLIRETLPFERR 173

  Fly   454 -TLTLARYILELSLMDYANISFSDSQMASAAL-FMALRMHG--------GPGQLDKQTWTSTLIY 508
             .|...|...:|... :..|.||.::.:..|| .:||.:..        |...:.|.:..|    
  Rat   174 NDLNFERLEAQLKAC-HCRIIFSKAKPSVLALAIIALEIQALKYVELTEGVECIQKHSKIS---- 233

  Fly   509 YTGYQLADFAEIV----TALNAGLHRKPRA----------TIKTIRNKYSHKIFH 549
              |..|..:.|:|    |..::....||..          |.:.:::.| ::|.|
  Rat   234 --GRDLTFWQELVSKCLTEYSSNKCSKPNGQKLKWIVSGRTARQLKHSY-YRITH 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 27/104 (26%)
Cyclin_C 435..555 CDD:281044 27/142 (19%)
Ccng1NP_037055.1 CYCLIN_CCNG1 50..147 CDD:410286 26/96 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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