DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and LOC1277779

DIOPT Version :10

Sequence 1:NP_651303.2 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_061510256.1 Gene:LOC1277779 / 1277779 VectorBaseID:AGAMI1_014622 Length:670 Species:Anopheles gambiae


Alignment Length:502 Identity:108/502 - (21%)
Similarity:193/502 - (38%) Gaps:118/502 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SGVGKKPTAQQLQALMDAKKQENLSVNVFGASKMTTRASSKVEDSVENCHKVLDKLEEALARPKP 163
            |.:.|...:|.||.....::.:....:...|:..:|.:|:....::.:.:........|.|....
Mosquito    37 SDLDKHGDSQHLQPSSKVRRNDRPRASTSTAAVASTSSSTAATTNLPHSYASTTTTAAAAATAAA 101

  Fly   164 RPKAVPA----------AKKTVL---------GEVQLPAMPNPMQIPVLLPPT--HNLAAPQVAA 207
            ...::|:          :|.|..         |..:.|...:....|:..|.|  .|:.:|....
Mosquito   102 PGLSMPSISSSSSLGSNSKTTAFSSDYTSDTQGSSEFPIASDFESYPLDSPATFGSNVLSPPCDL 166

  Fly   208 VKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGN-------FEAARRRSAKLQQKTEQQPQP 265
            ::            |:::.:|  |.::..|:..|.|.       |..|.:.:|.....:.....|
Mosquito   167 LR------------EEAVGLS--EWLAKGDTTPLDGAEHLYEVCFHKAAKPAAAAAATSGFGVVP 217

  Fly   266 LLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLKVREAEFPIADYMPRQI 330
            ....|..:...:|.|:|.:          :|.|    :|...|    |..|:.:.......|...
Mosquito   218 ASCYLTPSHKQRVCPLPSL----------SWTD----THEMWD----LMCRKDDLAWLAREPNMF 264

  Fly   331 H----LTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYL-CREVINKEKLQLLGAAAFFIA 390
            .    |...||::|:||:.||.|.::|:.||.:|||..:|.|| .::.:.|..|||||..|.|||
Mosquito   265 DDHPGLQPRMRSILIDWLNEVCEVYKLHRETYFLAVDYIDRYLSLKKELKKNHLQLLGITALFIA 329

  Fly   391 CKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKY----------------------DLG 433
            .|.:|..||.|.:|.|:.|||...::::|.|...|..:.:                      |:.
Mosquito   330 AKAEEIYPPKIGEFAYVTDGACTDEDILREELLILSALDWKINPVTVIGWLGLYMQINVTSRDVD 394

  Fly   434 IPLSYRFLRRYAR-----CAKVPMPTLTLARYILELSLMDYANISFSDSQMASAALFMALRMHGG 493
            :|:  |.|:|.:.     .|..|.|.   .|.|.:.: .|..||.       .||:.:.|:....
Mosquito   395 VPV--RNLKRKSNSTAHDTASTPSPK---KRKITDEN-ADVNNIQ-------QAAVTVGLQQQPL 446

  Fly   494 PGQLDKQTWTST---------LIY--YTGYQLADFAEIV--TALNAG 527
            ..|..|.:.:||         .:|  ::|.:.|..|:::  .:|:.|
Mosquito   447 QQQQQKLSSSSTSTANKTDDAFVYPQFSGMEFAHTAQLIDLCSLDVG 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_651303.2 CYCLIN_CCNB3_rpt1 290..431 CDD:410212 48/167 (29%)
CYCLIN_CCNB3_rpt2 435..555 CDD:410214 25/111 (23%)
LOC1277779XP_061510256.1 None

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