DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and Ccna2

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_033958.2 Gene:Ccna2 / 12428 MGIID:108069 Length:422 Species:Mus musculus


Alignment Length:455 Identity:136/455 - (29%)
Similarity:213/455 - (46%) Gaps:75/455 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 GASKMTTRASSKV-----EDSVENCHKVLDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNP 187
            |.|:.:.|.:...     ::..||.:.  :||..|   .:||.:||..|     |.|:.||    
Mouse     3 GTSRHSGRDAGSALLSLHQEDQENVNP--EKLAPA---QQPRAQAVLKA-----GNVRGPA---- 53

  Fly   188 MQIPVLLPPTHNLAAPQVAAVK--PVRRISNDFNKTEDSLYMSALEDVSSCDSMRLS-GNFEAAR 249
                    |...|...:||.:|  |:    ||.:.|....:.:    ||...:..:. ...|..:
Mouse    54 --------PQQKLKTRRVAPLKDLPI----NDEHVTAGPSWKA----VSKQPAFTIHVDEAEETQ 102

  Fly   250 RRSAKLQQKTEQQPQPLLLTLPETAPSQVVPIPPVPEEVE---------DFDRKNWDDPFQVSH- 304
            :|.|:|:: ||.: ..|......:.|....|:.|:...::         |......|.|..|:. 
Mouse   103 KRPAELKE-TECE-DALAFNAAVSLPGARKPLTPLDYPMDGSFESPHAMDMSIVLEDKPVNVNEV 165

  Fly   305 --YAMDIFNYLKVREAEF-PIADYMPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVD 366
              |..||..||:..|.:. |...||.||..:|..||.:||||:|||.|.::|.:|||:|||..:|
Mouse   166 PDYQEDIHTYLREMEVKCKPKVGYMKRQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYID 230

  Fly   367 LYLCREVINKEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYD 431
            .:|....:.:.||||:|.||..:|.|::|..||.:.:|:||.|..|:..:::|||...|:|:.:|
Mouse   231 RFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYSKKQVLRMEHLVLKVLAFD 295

  Fly   432 LGIPLSYRFLRRY------ARCAKVPMPTLTLARYILELSLMD---YANISFSDSQMASAALFMA 487
            |..|...:||.:|      |.| ||.    :||.::.||||:|   |  :.:..|.:|.||..:|
Mouse   296 LAAPTVNQFLTQYFLHLQPANC-KVE----SLAMFLGELSLIDADPY--LKYLPSLIAGAAFHLA 353

  Fly   488 LRMHGGPGQLDKQTWTSTLIYYTGYQLADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEVA 552
            |....|      |:|..:|...|||.|......:..|:....:.|:...::||.||.|..:|.|:
Mouse   354 LYTVTG------QSWPESLAQQTGYTLESLKPCLVDLHQTYLKAPQHAQQSIREKYKHSKYHSVS 412

  Fly   553  552
            Mouse   413  412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 53/125 (42%)
Cyclin_C 435..555 CDD:281044 39/127 (31%)
Ccna2NP_033958.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 19/80 (24%)
Cyclin_N2 22..152 CDD:293109 36/161 (22%)
Cyclin_N 171..297 CDD:278560 53/125 (42%)
Cyclin_C 299..417 CDD:281044 39/127 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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