DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and Ccna2

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_008759125.1 Gene:Ccna2 / 114494 RGDID:621059 Length:445 Species:Rattus norvegicus


Alignment Length:495 Identity:135/495 - (27%)
Similarity:212/495 - (42%) Gaps:108/495 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 AQDEEQSGVG--KKPTAQQ--LQALMDAKKQENLSVNVFGAS---KMTTRASSKVEDSVENCHKV 150
            :|.|:|..|.  |...|||  .||::.|.|       |.|.:   ::.||..:.::|...|...|
  Rat    14 SQQEDQENVNPEKVAPAQQPRAQAVLKAGK-------VRGPAPQQRLKTRRVAPLKDLPINDEHV 71

  Fly   151 ------------------LDKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPPT 197
                              :|:.||...||..:.:............|.||....|: :|:..|..
  Rat    72 PTVPSWKAVSKQPAFTIHVDEAEETQKRPAEQKETQCEDALAFSAAVSLPGARKPL-VPLDYPMD 135

  Fly   198 HNLAAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQQ 262
            .:............|::...::.|.::      .||.|..:|.:|                    
  Rat   136 GSFGQTHGRQNSCYRQLCRCYDLTVET------RDVESPHAMDIS-------------------- 174

  Fly   263 PQPLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHYAMDIFNYLKVREAEF-PIADYM 326
                 :.|.:..|..|..:|                     .|..||..||:..|.:. |...||
  Rat   175 -----IVLEDEKPVNVNEVP---------------------DYHEDIHTYLREMEVKCKPKVSYM 213

  Fly   327 PRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIAC 391
            .||..:|..||.:||||:|||.|.::|.:|||:|||..:|.:|....:.:.||||:|.||..:|.
  Rat   214 KRQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 278

  Fly   392 KYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRY------ARCAKV 450
            |::|..||.:.:|:||.|..|:..:::|||...|:|:.:||..|...:||.:|      |.| ||
  Rat   279 KFEEIYPPEVAEFVYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFLTQYFLHLQPANC-KV 342

  Fly   451 PMPTLTLARYILELSLMD---YANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGY 512
            .    :||.::.||||:|   |  :.:..|.:|.||..:||....|      |:|..:|:..|||
  Rat   343 E----SLAMFLGELSLIDADPY--LKYLPSLIAGAAFHLALYTVTG------QSWPESLVQKTGY 395

  Fly   513 QLADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEVA 552
            .|......:..|:....:.|:...::||.||.|..:|.|:
  Rat   396 TLESLKPCLMDLHQTYLKAPQHAQQSIREKYKHSKYHSVS 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 53/125 (42%)
Cyclin_C 435..555 CDD:281044 39/127 (31%)
Ccna2XP_008759125.1 Cyclin_N2 17..174 CDD:293109 35/170 (21%)
Cyclin_N 194..320 CDD:278560 53/125 (42%)
Cyclin_C 322..440 CDD:281044 39/127 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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