DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and ccnb3

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_002939245.1 Gene:ccnb3 / 100494711 XenbaseID:XB-GENE-920213 Length:416 Species:Xenopus tropicalis


Alignment Length:429 Identity:176/429 - (41%)
Similarity:239/429 - (55%) Gaps:59/429 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 DKLEEALARPKPRPKAVPAAKKTVLGEVQLPAMPNPMQIPVLLPPTHNLAAPQVAAVKPVRRISN 216
            ||:|.:..:..|......|.|:...|::     .|..:.|.||...           |..::||.
 Frog    30 DKVEISQTKRSPSSPQGGAKKRAAFGDI-----TNAHKNPQLLQKK-----------KEGQKIST 78

  Fly   217 DFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQQPQPLLLTLPETAPSQV--- 278
            ...|...:      .||:..:.:.:.           |.|:|.....:|    |||....::   
 Frog    79 KKTKNVPT------NDVTKNNELNIK-----------KTQKKAIVTEEP----LPELKEEKLSAE 122

  Fly   279 ----VPIPPVPEE------VEDFDRKNWDDPFQVSHYAMDIFNYLKVREAEFPIADYMPRQIHLT 333
                |....:|||      |||.|:.:.||||..|.||||||||::.||.:|.:.:||..|..::
 Frog   123 EKKSVTAKEIPEEKVLPPGVEDIDQDSLDDPFSNSEYAMDIFNYMRDREEKFLLPNYMEMQTDIS 187

  Fly   334 TWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAFFIACKYDERQP 398
            ..||.:||||||||||.|||||||||||||:||.||...|..||||||:|:.|..||.|::||.|
 Frog   188 KDMRAILVDWMVEVQENFELNHETLYLAVKMVDHYLAATVSMKEKLQLIGSTAVLIASKFEERCP 252

  Fly   399 PLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFLRRYARCAKVPMPTLTLARYILE 463
            |.::||:||||.||..||:|.||.|.|:.:.:|:.||:.||||||:|:||...|.||||||||.|
 Frog   253 PCVDDFMYICDDAYKRDEVVAMEMEILQKLNFDINIPVPYRFLRRFAKCAHATMETLTLARYICE 317

  Fly   464 LSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGYQLADFAEIVTALNAGL 528
            |:|.:|..:..|.|:||:..|.:||:|.|..|      ||:||.:|:|||..|...:|..||..|
 Frog   318 LTLQEYDFVQESASKMAAGCLLLALKMKGLGG------WTATLQHYSGYQTKDLLPLVKRLNFLL 376

  Fly   529 HRKPRATIKTIRNKYSHKIFHEVAKVP---LLTNQELFQ 564
            ...|...:|.:|.||||::|.||||:|   :||.:|..|
 Frog   377 THPPNEKLKAVRGKYSHRVFFEVAKLPPMDVLTIEESLQ 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 72/124 (58%)
Cyclin_C 435..555 CDD:281044 58/119 (49%)
ccnb3XP_002939245.1 COG5024 <120..396 CDD:227357 142/281 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4335
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H122362
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 1 1.000 - - FOG0008749
OrthoInspector 1 1.000 - - oto105311
Panther 1 1.100 - - LDO PTHR10177
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.050

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