DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and ccni2

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_003200952.1 Gene:ccni2 / 100330479 ZFINID:ZDB-GENE-081106-2 Length:310 Species:Danio rerio


Alignment Length:121 Identity:27/121 - (22%)
Similarity:55/121 - (45%) Gaps:9/121 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 ADYMPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCREVINKEKLQLLGAAAF 387
            :|..|.|.|       .::.|:.|:...|:.:.|||.|.|.:::..|.......:.|:.:...:.
Zfish    40 SDISPSQYH-------EVILWLREMNVIFQFSTETLALGVCVLNSLLATVKTQLKYLKCMAITSL 97

  Fly   388 FIACKYDERQPPL--IEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLSYRFL 441
            .:|.|.:|....:  ::|.|......::..|::||||..|..:.::|.:.....|:
Zfish    98 ILAAKINEEDEVIASVKDLLEQSRCKFSTAEILRMERVILHKLHWEL
YLATPMDFI 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 25/111 (23%)
Cyclin_C 435..555 CDD:281044 1/7 (14%)
ccni2XP_003200952.1 Cyclin_N 36..144 CDD:278560 25/110 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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