DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB3 and ccnb1

DIOPT Version :9

Sequence 1:NP_001262934.1 Gene:CycB3 / 42971 FlyBaseID:FBgn0015625 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_031753568.1 Gene:ccnb1 / 100101736 XenbaseID:XB-GENE-921525 Length:392 Species:Xenopus tropicalis


Alignment Length:390 Identity:119/390 - (30%)
Similarity:193/390 - (49%) Gaps:57/390 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 LAAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVS---SCDSMRLSGNFEAARR----RSAKLQQ 257
            :|..:.|..|||.|..|            ||.|:.   |...:.|....:|.|:    :|.||..
 Frog    21 MAGRKAAVSKPVLRPRN------------ALGDIGNQISKAKVPLKRATKALRKPPVEKSEKLIV 73

  Fly   258 KTEQQPQPLLLTLP------ETAPSQVVPIPP------VPEEVEDFDRKNWDDPFQVSHYAMDIF 310
            ..:..|:.....:|      ||:...:..|||      :|  ::|.|.::.|:|...|.|..||:
 Frog    74 PEDYVPKEAETPVPDSPNPMETSVCVIEEIPPAFSSALIP--IKDVDAEDSDNPMLCSDYVKDIY 136

  Fly   311 NYLKVREAEFPIADYMPRQI---HLTTWMRTLLVDWMVEVQETFELNHETLYLAVKIVDLYLCRE 372
            .||:..|.:..|   .||.:   .:...||.:||||:|:|...|:|..||:.:.:.|:|.:|...
 Frog   137 CYLRNMEVKQAI---RPRYLDGQEINGNMRAILVDWLVQVHLRFKLLQETMSMTIAILDRFLQEN 198

  Fly   373 VINKEKLQLLGAAAFFIACKYDERQPPLIEDFLYICDGAYNHDELVRMERETLRVIKYDLGIPLS 437
            .:.|:.|||.|.:|.||||||:|...|.|.||.::.|..|...::..||.:.|||:|:|:|.||.
 Frog   199 PVPKKLLQLAGVSAMFIACKYEEIYCPSIGDFAFVTDHTYTKSQIRNMEMQILRVLKFDIGRPLP 263

  Fly   438 YRFLRRYARCAKVPMPTLTLARYILELSLMDYANISFSDSQMASAALFMALRMHGGPGQLDKQTW 502
            ..||||.::..:|.....|||:|::||.:.||..:....||:|:||..:|:::      |:...|
 Frog   264 LHFLRRASKIGEVDSVHHTLAKYLIELVMTDYDMVHVPPSQLAAAAFCLAMKI------LNSGEW 322

  Fly   503 TSTLIYYTGYQ-------LADFAEIVTALNAGLHRKPRATIKTIRNKYSHKIFHEVAKVPLLTNQ 560
            |..|.:|..|:       :...|:.:..:|.| |.|    ..::::|||.....:|:.:|.|.::
 Frog   323 TPVLEHYMAYKESSLMPVMQHIAKNIVKVNGG-HTK----FLSVKSKYSSSRQMKVSCLPHLKSE 382

  Fly   561  560
             Frog   383  382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycB3NP_001262934.1 Cyclin_N 308..433 CDD:278560 49/127 (39%)
Cyclin_C 435..555 CDD:281044 36/126 (29%)
ccnb1XP_031753568.1 CYCLIN_SF 128..256 CDD:424085 49/130 (38%)
CYCLIN_SF 261..381 CDD:424085 38/130 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D475911at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R194
SonicParanoid 1 1.000 - - X94
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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