DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elal and col-92

DIOPT Version :10

Sequence 1:NP_524491.1 Gene:Elal / 42970 FlyBaseID:FBgn0013949 Length:329 Species:Drosophila melanogaster
Sequence 2:NP_499408.1 Gene:col-92 / 176528 WormBaseID:WBGene00000667 Length:304 Species:Caenorhabditis elegans


Alignment Length:271 Identity:89/271 - (32%)
Similarity:103/271 - (38%) Gaps:69/271 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FAALALIQIASGQASQFSR------DESQEDQKTEFNLASTLTGGITSSRHRQRANLNSQLYPGL 67
            ||.:..|:.:...||:|:|      ||:.|            ||...|    |..:.:....|| 
 Worm    61 FAEVNHIRGSPKNASRFARQAGYGTDEAVE------------TGNTGS----QGGSCSGCCLPG- 108

  Fly    68 GQLGSGYAGATGSIDDAHGHEQGGSGVRVASTNSVVFPGNQSPNPALTITGGHQIPAYPPPGFPG 132
               .:|.||..|.  .......|.:|:          |||....||....     |..|||..|.
 Worm   109 ---AAGPAGTPGK--PGRPGRPGAAGL----------PGNPGRPPAQPCE-----PITPPPCKPC 153

  Fly   133 QQAPVPYPAAGGSSG--GSSSSGGYQS-AGAVSPPGYPVAGAVPAQYPVGVP--PQQPVGAGAPG 192
            .|.|...|.|.|..|  |:....|..| |||..|.|           |.|.|  |..|..|||||
 Worm   154 PQGPAGAPGAPGPQGDAGAPGQAGQGSGAGAPGPAG-----------PKGAPGAPGNPGQAGAPG 207

  Fly   193 YFPGTGAY----PGYPYPGVYLPQYPAYPQPAQFPAYGVLPGAVAQPGVPGVAGVPGAPGVAGVP 253
            . ||:.|.    ||  .||...||.|  |.||..|.....||....||..|.:|.||.||..|.|
 Worm   208 Q-PGSDAQSESSPG--APGQAGPQGP--PGPAGSPGAPGGPGQAGAPGPKGPSGAPGQPGADGNP 267

  Fly   254 GAAGQAPATSG 264
            ||.|| |..||
 Worm   268 GAPGQ-PGQSG 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ElalNP_524491.1 PHA03247 <105..282 CDD:223021 67/169 (40%)
col-92NP_499408.1 Col_cuticle_N 12..64 CDD:198156 2/2 (100%)
gly_rich_SclB <107..>283 CDD:468478 75/209 (36%)

Return to query results.
Submit another query.