DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH4 and ACA3

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_196038.1 Gene:ACA3 / 830296 AraportID:AT5G04180 Length:277 Species:Arabidopsis thaliana


Alignment Length:269 Identity:73/269 - (27%)
Similarity:105/269 - (39%) Gaps:80/269 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DWNVKC--GERQSPIALWSCNAITCNVPKLKFL---------NYHKSLCDPLSVI--NNGLTVLM 80
            :|.: |  |:|||||.|         .||:..:         .|:|    |:..|  |.|..  |
plant    45 EWKI-CGTGKRQSPINL---------TPKIARIVHNSTEILQTYYK----PVEAILKNRGFD--M 93

  Fly    81 RIPKTVDGSRPSLCISTEGQQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNASYKSN 145
            :: |..|.:...:...|:    ::..|.|:|      ..|||.|||.....|:|:|||:..    
plant    94 KV-KWEDDAGKIVINDTD----YKLVQSHWH------APSEHFLDGQRLAMELHMVHKSVE---- 143

  Fly   146 KEAGLQPNGFAVLALFIRNLEDPNIETPAMNMICKQVSSITKLDDSCPLEDSMALQDLFASI--- 207
                   ...||:.:..|..| ||.      .|.:.:..|.|:.|         :||...||   
plant   144 -------GHLAVIGVLFREGE-PNA------FISRIMDKIHKIAD---------VQDGEVSIGKI 185

  Fly   208 -------DSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQLRDSRDQRVLNTYREL 265
                   |..|::.|:||||||||.|.|:|.:......|.:|   ....|.|:|........|..
plant   186 DPREFGWDLTKFYEYRGSLTTPPCTEDVMWTIINKVGTVSRE---QIDVLTDARRGGYEKNARPA 247

  Fly   266 QDGHDRPVY 274
            |..:.|.||
plant   248 QPLNGRLVY 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 69/259 (27%)
ACA3NP_196038.1 alpha_CA_prokaryotic_like 35..257 CDD:239398 73/269 (27%)

Return to query results.
Submit another query.