DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH4 and ACA6

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_193832.1 Gene:ACA6 / 827847 AraportID:AT4G21000 Length:260 Species:Arabidopsis thaliana


Alignment Length:248 Identity:59/248 - (23%)
Similarity:95/248 - (38%) Gaps:64/248 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLVARSFAPINSGTRSHFGF---------NYDKQGRDWNV-KCGERQSPIALWSCNAITCNVPK 55
            :|:.||..     |.:..|.:         .:.|....|.| ..|:.||||.|........:...
plant    24 LFVYAREI-----GNKPLFTYKQKTEKGPAEWGKLDPQWKVCSTGKIQSPIDLTDERVSLIHDQA 83

  Fly    56 LKFLNYHKSLCDPLSVI--NNGLTVLMRIPKTVDGSRPSLCISTEGQQVFEADQLHFHWGSALSK 118
            |.  .::|    |.|.:  :.|..|:  :....||.:     .|..|..::..|.|:|      .
plant    84 LS--KHYK----PASAVIQSRGHDVM--VSWKGDGGK-----ITIHQTDYKLVQCHWH------S 129

  Fly   119 GSEHCLDGNYYDGEVHIVHKNASYKSNKEAGL----QPNGFAVLALFIRNLEDPNIETPAMNMIC 179
            .|||.::|..||.|:|:||.:||.|:.....|    :|:.|                   :..|.
plant   130 PSEHTINGTSYDLELHMVHTSASGKTTVVGVLYKLGEPDEF-------------------LTKIL 175

  Fly   180 KQVSSITKLDDSCPLEDSMALQDLFASIDSQKYFTYQGSLTTPPCAEAVIWFV 232
            ..:..:.|.:....:.|...::     .::..::.|.||||.|||.|.|||.|
plant   176 NGIKGVGKKEIDLGIVDPRDIR-----FETNNFYRYIGSLTIPPCTEGVIWTV 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 51/204 (25%)
ACA6NP_193832.1 PLN02179 1..235 CDD:177835 59/248 (24%)

Return to query results.
Submit another query.