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Protein Alignment CAH4 and Car15

DIOPT Version :9

Sequence 1:	NP_651298.1	Gene:	CAH4 / 42965	FlyBaseID:	FBgn0039235	Length:	279	Species:	Drosophila melanogaster
Sequence 2:	NP_085035.1	Gene:	Car15 / 80733	MGIID:	1931324	Length:	324	Species:	Mus musculus

Alignment Length:	306	Identity:	94/306 - (30%)
Similarity:	132/306 - (43%)	Gaps:	75/306 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 FLVARSFAPI-NSGTRSHFGFNYDKQGRDWNVKCGERQSPIALWSCNAITCNVP----------- 54
            ||:.:..|.: :|||     :.||.|    :.|||.     |.|...|..|..|
Mouse    10 FLLIQLAAQVDSSGT-----WCYDSQ----DPKCGP-----AHWKELAPACGGPTQSPINIDLRL 60

  Fly    55 -----KLK---FLNYHKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCISTEGQQV----FEADQ 107
                 .||   |..|..:..||..:.|:|.|||:|:     .|....|.:..|..:    :...|
Mouse    61 VQRDYTLKPFIFQGYDSAPQDPWVLENDGHTVLLRV-----NSCQQNCPAIRGAGLPSPEYRLLQ 120

  Fly   108 LHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNASYKSNKEAGLQPNGFAVLALFIRNLEDPNIET 172
            |||||||...:||||.||..:...|:|:||.|..|:|.::|..||:|||:||:.:...:..|...
Mouse   121 LHFHWGSPGHQGSEHSLDEKHGSMEMHMVHMNTKYQSMEDARSQPDGFAILAVLLVEEDRDNTNF 185

  Fly   173 PAMNMICKQVSSITKLDDSCP-----LEDSMALQDLFAS-IDSQKYFTYQGSLTTPPCAEAVIWF 231
            .|:      ||.:..|  |.|     |..:.||..|..| :...:|:.|.||||||.|..||:|.
Mouse   186 SAI------VSGLKNL--SSPGVAVNLTSTFALASLLPSALRLLRYYRYSGSLTTPGCEPAVLWT 242

  Fly   232 VFPTPLDVPKELWKHFWQLRDSRDQRVLNTYRELQDG----HDRPV 273
            ||...:.:              ...:|:.....||.|    |.||:
Mouse   243 VFENTVPI--------------GHAQVVQFQAVLQTGPPGLHPRPL 274

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.