DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and ca6

DIOPT Version :9

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001072482.1 Gene:ca6 / 779937 XenbaseID:XB-GENE-494019 Length:121 Species:Xenopus tropicalis


Alignment Length:61 Identity:30/61 - (49%)
Similarity:41/61 - (67%) Gaps:3/61 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 VFEADQLHFHWGSALSK--GSEHCLDGNYYDGEVHIVHKNA-SYKSNKEAGLQPNGFAVLA 159
            ::.|.|:|.|||...|:  ||||.:||..|..|:|:||.|: :||:..||..:|||.||||
 Frog    10 LYTAVQMHLHWGGLESETSGSEHTIDGMRYLAELHVVHYNSGTYKTFDEAKDKPNGLAVLA 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 30/61 (49%)
ca6NP_001072482.1 alpha_CA <1..>96 CDD:320708 30/61 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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