DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and CA12

DIOPT Version :9

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001209.1 Gene:CA12 / 771 HGNCID:1371 Length:354 Species:Homo sapiens


Alignment Length:287 Identity:84/287 - (29%)
Similarity:132/287 - (45%) Gaps:42/287 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 APINSGTRSHFGFNYDKQGRDWNVK---CGE-RQSPIALWS-CNAITCNVPKLKFLNYHKSLCDP 68
            ||:|....::||.:.:   ..|:.|   ||. .||||.|.| ......::..|:|..|:.|....
Human    25 APVNGSKWTYFGPDGE---NSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQ 86

  Fly    69 LSVINNGLTVLMRIPKTVDGSRPSLCISTEG-QQVFEADQLHFHWGSALS-KGSEHCLDGNYYDG 131
            ..:.|||.:|.:.:|..         :..:| |..:.|.|||.|||:... .||||.:.|.::..
Human    87 FLLTNNGHSVKLNLPSD---------MHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAA 142

  Fly   132 EVHIVHKN------ASYKSNKEAGLQPNGFAVLALFIRNLEDPNIETPAMNMICKQVSSITKLDD 190
            |:||||.|      ||..|||..||     ||||:.|    :.....|:.:.|...:..: |...
Human   143 ELHIVHYNSDLYPDASTASNKSEGL-----AVLAVLI----EMGSFNPSYDKIFSHLQHV-KYKG 197

  Fly   191 SCPLEDSMALQDLFASIDSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPK------ELWKHFWQ 249
            .........:::|... .:.:|:.|:||||||||...|:|.||..|:.:.:      |...:...
Human   198 QEAFVPGFNIEELLPE-RTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTH 261

  Fly   250 LRDSRDQRVLNTYRELQDGHDRPVYRS 276
            :.|...:.::|.:|::|...:|.||.|
Human   262 MDDPSPREMINNFRQVQKFDERLVYTS 288

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 73/254 (29%)
CA12NP_001209.1 alpha_CA_XII_XIV 39..289 CDD:239400 79/273 (29%)