DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and ca10a

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001032198.2 Gene:ca10a / 641327 ZFINID:ZDB-GENE-051030-123 Length:328 Species:Danio rerio


Alignment Length:260 Identity:67/260 - (25%)
Similarity:117/260 - (45%) Gaps:57/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVARSFAPINSGTRSHFGFNYDKQGRDWNV-KCGERQSPIALWSCNAITCNVPKLKFLNYHKSLC 66
            :|..||.|:    .|.:|.    ....||: ..|:||||:     |..|.::....||.      
Zfish    38 VVQGSFVPV----PSFWGL----VNSAWNLCSVGKRQSPV-----NIETSHMIFDPFLT------ 83

  Fly    67 DPL-----------SVINNGLTVLMRIPK----TVDGSRPSLCISTEGQQVF--EADQLHFHWGS 114
             ||           ::.|.|..|.:|:.|    .:.|          |...:  ..:::..|:||
Zfish    84 -PLRLNTGGRKVGGTMYNTGRHVSLRLDKEHLVNISG----------GPMTYSHRLEEIRLHFGS 137

  Fly   115 ALSKGSEHCLDGNYYDGEVHIVHKNAS-YKSNKEAGLQPNGFAVLALFIRNLEDPNIETPAMNMI 178
            ...:||||.|:|..:.|||.::|.|.. |.:..||...|||..::::|::..|..|   ..:|.:
Zfish   138 EDGQGSEHLLNGQAFSGEVQLIHYNHELYTNYTEAAKSPNGLVIVSIFMKISETSN---SFLNRM 199

  Fly   179 CKQ--VSSITKLDDSCPLEDSMALQDLFASIDSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPK 241
            ..:  ::.||..:|:. |...:.:::::.  ::..:.||:||:|.|||.|...|.:...|:.|.|
Zfish   200 LNRDTITRITYKNDAY-LLSGLNIEEVYP--ETASFITYEGSMTIPPCYETATWILMNKPIYVTK 261

  Fly   242  241
            Zfish   262  261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 59/227 (26%)
ca10aNP_001032198.2 alpha_CARP_X_XI_like 46..302 CDD:239395 63/252 (25%)

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