DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and ca5a

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001104671.1 Gene:ca5a / 569989 ZFINID:ZDB-GENE-080220-57 Length:310 Species:Danio rerio


Alignment Length:259 Identity:82/259 - (31%)
Similarity:121/259 - (46%) Gaps:39/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GERQSPIALWSCNAITCNVPKLKFL--NYHKSLCDPLSVINNGLTVLMRIPKTVDGSRPSLCIST 97
            |:|||||.:....:|.  .|:|:.|  .|....|.  .:.|||.:.|:....|.|.|      :.
Zfish    62 GDRQSPIDIEVRKSIF--NPQLRPLKVQYDPRTCQ--QIWNNGYSFLVEYDDTTDKS------TV 116

  Fly    98 EG---QQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNA-SYKSNKEAGLQPNGFAVL 158
            :|   :..:...|.|||||...:.||||.:|...|..|:||||.|: .|...:||.::.||.||:
Zfish   117 KGGPLENQYRLCQFHFHWGENNNWGSEHSIDRRLYAAELHIVHWNSDKYSLFEEAVMEENGLAVI 181

  Fly   159 ALFIR------NLEDPNIETPAMNMICKQVSSITKLDDSCPLEDSMALQDLFASIDSQKYFTYQG 217
            .:|::      .|:......||:.. ...|....|.|.||.|.::::           .|:||.|
Zfish   182 GVFLKVGKRHEGLQKLVDALPAVRH-KDSVVEFNKFDPSCLLPENIS-----------DYWTYPG 234

  Fly   218 SLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQL----RDSRDQR-VLNTYRELQDGHDRPVYRS 276
            ||||||..|||.|.|....::|..:....|..|    .:.:.|| ::|.:|..||...|.|:.|
Zfish   235 SLTTPPLTEAVTWIVMKQHIEVSHDQLAVFRSLLFTSAEEQVQRSMVNNFRVQQDLKGRAVHSS 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 80/255 (31%)
ca5aNP_001104671.1 alpha_CA 62..299 CDD:469577 82/259 (32%)

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