DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and ca7

DIOPT Version :9

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_957107.1 Gene:ca7 / 564201 ZFINID:ZDB-GENE-040426-1786 Length:263 Species:Danio rerio


Alignment Length:277 Identity:86/277 - (31%)
Similarity:130/277 - (46%) Gaps:32/277 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TRSHFGFNYDKQGRDWN----VKCGERQSPIALWSCNAITCNVPKLKFLNYHKSLCDPLSVINNG 75
            |..|:|:..|.....|:    :..|.|||||.:....|:..:  ||..::...:.|..||:.|||
Zfish     2 TGHHWGYGEDNGPSAWHKDYPIAEGNRQSPIDIVPSEAVFDS--KLSPISLSYNNCTSLSISNNG 64

  Fly    76 LTVLMRIPKTVDGSRPSLCISTEGQQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNA 140
            .:|::..   ||....|:......:.::...|.||||||....||||.:.|..:..|:|:||.||
Zfish    65 HSVVVEF---VDTDERSVITGGPLENMYRLKQFHFHWGSKGCCGSEHTVAGKTFVSELHLVHWNA 126

  Fly   141 S-YKSNKEAGLQPNGFAVLALFIRNLEDPNI---ETPAMNMI--CKQVSSITKLDDSCPLEDSMA 199
            : |||..||...|:|.|||.:|:...::...   .|.|:.|:  ...::.....:..|.|.:|: 
Zfish   127 NKYKSFSEAAAAPDGLAVLGIFLETGDEHRALHQITDALYMVRFKGSLAEFKGFNPKCLLPNSL- 190

  Fly   200 LQDLFASIDSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQL----RDSRDQ-RVL 259
                       :|:||.|||||||..|:|.|.|...|:.|.::....|..|    .:..|: |:.
Zfish   191 -----------EYWTYPGSLTTPPLYESVTWIVLKEPIYVSEKQMGKFRTLLFNGEEEEDRNRME 244

  Fly   260 NTYRELQDGHDRPVYRS 276
            |.||..|....|.|..|
Zfish   245 NNYRPPQPLKGRMVRAS 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 79/249 (32%)
ca7NP_957107.1 alpha_CA_VII 26..262 CDD:239402 81/253 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579176
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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