DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and ca4b

DIOPT Version :9

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001159683.1 Gene:ca4b / 553246 ZFINID:ZDB-GENE-080815-5 Length:304 Species:Danio rerio


Alignment Length:257 Identity:87/257 - (33%)
Similarity:132/257 - (51%) Gaps:21/257 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DW---NVKCG-ERQSPIALWSCNAIT-CNVPKLKFLNYHKSLCDPLSVINNGLTVLMRIP--KTV 86
            ||   ...|| .:||||.:.:..|.| ..:..::|.:|.:.|  ...::|||.||.:.:|  ..:
Zfish    39 DWATVAAACGNNKQSPINIVTNKASTDSRLTPVQFTDYQERL--NAVIVNNGHTVQINLPDRAKI 101

  Fly    87 DGSRPSLCISTEGQQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKNASYKSNKEAGLQ 151
            :|:...        ..::|.|||.|||.....||||.:||..:..|:|:||....|.|.::|...
Zfish   102 NGANLG--------STYKAQQLHLHWGKNGGPGSEHTIDGEKFPMELHVVHIKEEYNSLEQAVGD 158

  Fly   152 PNGFAVLALFIRNLEDPNIETPAMNMICKQVSSITKLDDSCPLEDSMALQDLFASIDSQKYFTYQ 216
            .:|.|||..|....|:.|....|   |...:::||..:.:..| .:::|..|..:.|..|||.|:
Zfish   159 SSGVAVLGFFYEESENANKNYDA---IINSLTNITHPESNAEL-GAISLDMLIPNEDLDKYFRYE 219

  Fly   217 GSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQLRDSRDQRVLNTYRELQDGHDRPVYRSKA 278
            ||||||.|||||:|.:|...:.:.||....|..|..|....::||:|.:|...|||||.|::
Zfish   220 GSLTTPGCAEAVVWTIFEKTIPLSKEQLSAFSNLTFSDGAAMVNTFRPIQLRFDRPVYYSRS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 81/242 (33%)
ca4bNP_001159683.1 alpha_CA_IV_XV_like 50..278 CDD:239391 81/241 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579117
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 1 1.000 - - mtm6335
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18952
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.810

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