DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and ca2

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001015729.1 Gene:ca2 / 548446 XenbaseID:XB-GENE-484348 Length:260 Species:Xenopus tropicalis


Alignment Length:239 Identity:69/239 - (28%)
Similarity:110/239 - (46%) Gaps:38/239 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FGFNYDKQGRDWN----VKCGERQSPIALWSCNAITCNVPKLKFLNYHKSLC---DPLS---VIN 73
            :|:..|.....|:    :..|:.||||.:.|..|        |:.::.|.:.   ||.:   ::|
 Frog     5 WGYGPDNGPATWHHAFPIAHGDHQSPINIVSAEA--------KYDHHLKPISIKYDPSTAKVILN 61

  Fly    74 NGLTVLMRIPKTVDGSRPSLCISTEG--QQVFEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIV 136
            ||....:....:.|.|     :.:.|  ...:...|.||||||....||||.:||..|:.|:|:|
 Frog    62 NGHAFNVEFDDSEDKS-----VLSGGAVSHPYRLKQFHFHWGSCDGHGSEHTVDGVKYEAELHLV 121

  Fly   137 HKNASYKSNKEAGLQPNGFAVLALFIRNLEDPNIETPAMNMICKQVSSITKLDDSCPLED---SM 198
            |.|..|.|..||....:|.||:.:|::..|    ..|.:..:...:..|....:..|..|   |:
 Frog   122 HWNTKYASMAEAVKHCDGLAVVGVFLKVGE----AHPGLQKVLDALKLIPNKGNEAPFTDYDPSV 182

  Fly   199 ALQDLFASIDSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPKE 242
            .|.:   |:|   ::.|:|||||||..:.|:|.|...|:.|..:
 Frog   183 LLPN---SLD---FWNYKGSLTTPPLLQCVLWHVLREPIAVSNQ 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 66/219 (30%)
ca2NP_001015729.1 alpha_CA 1..259 CDD:469577 69/239 (29%)

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