DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH4 and CAH15

DIOPT Version :10

Sequence 1:NP_651298.1 Gene:CAH4 / 42965 FlyBaseID:FBgn0039235 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_611525.1 Gene:CAH15 / 37366 FlyBaseID:FBgn0034560 Length:332 Species:Drosophila melanogaster


Alignment Length:271 Identity:64/271 - (23%)
Similarity:122/271 - (45%) Gaps:27/271 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GTRSHFGFNYDKQGRDWNVKCGERQSPIALWSCNAITCNVPKLKFL-NYHKSLCDPLSVINNGLT 77
            |:...:.:::|:....|:..| ..||||.: ..|.:..|......: :::.|:...:.:.|||.|
  Fly    77 GSPESYNYDWDQGPHTWDTAC-NNQSPINI-DMNCVEINYFDTPLIWSHYNSIPLGIRLENNGHT 139

  Fly    78 VLMRIPKTVDGSRPSLCISTEGQQV---FEADQLHFHWGSALSKGSEHCLDGNYYDGEVHIVHKN 139
            :::|      .:.|....|.:|..:   |:..::.|.|..|.|.||||.||.::...|:..:|.:
  Fly   140 LILR------AAFPERTPSIDGGDLLGRFDFREISFRWSWASSLGSEHTLDHHHSPLEMQCLHTD 198

  Fly   140 ASYKSNKEAGLQPNGFAVLALFIRNLEDPNIETPAMNMICKQVSSIT---KLDDSCPLEDSMALQ 201
            ..       |......:...|.|..:.|.:...|.::::.:.::::.   ::.:..|...|..:.
  Fly   199 GD-------GCDGCSSSQGVLMISYMFDLSEHNPFLDVLIQHLAAVEQAGQVVEVPPFPLSYLMS 256

  Fly   202 DLFASIDSQKYFTYQGSLTTPPCAEAVIWFVFPTPLDVPKELWKHFWQLRDSRDQRVLNTYRELQ 266
            ..:     .|:::|.||||.|||.....|.::|..|.:.:.....|.||||.|..|:....|.:|
  Fly   257 PFY-----DKFYSYNGSLTEPPCHRGAEWLIYPESLAISERQLNEFRQLRDRRGSRIARNARPVQ 316

  Fly   267 DGHDRPVYRSK 277
            ...||.||.::
  Fly   317 PIGDRMVYLNR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH4NP_651298.1 alpha_CA 35..274 CDD:238200 58/245 (24%)
CAH15NP_611525.1 alpha_CARP_receptor_like 82..325 CDD:239396 62/262 (24%)

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